Oncorhynchus kisutch (coho salmon): 109871378
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Entry
109871378 CDS
T09179
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04514
Cell adhesion molecules
oki04672
Intestinal immune network for IgA production
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109871378
04514 Cell adhesion molecules
109871378
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109871378
09142 Cell motility
04820 Cytoskeleton in muscle cells
109871378
04810 Regulation of actin cytoskeleton
109871378
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109871378
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109871378
04515 Cell adhesion molecules [BR:
oki04515
]
109871378
04090 CD molecules [BR:
oki04090
]
109871378
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109871378
Exosomal proteins of other cancer cells
109871378
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109871378
CD molecules [BR:
oki04090
]
Proteins
109871378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF5370
Motif
Other DBs
NCBI-GeneID:
109871378
NCBI-ProteinID:
XP_020317820
Ensembl:
ENSOKIG00005036271
LinkDB
All DBs
Position
LG26:complement(31352328..31390807)
Genome browser
AA seq
1019 aa
AA seq
DB search
MERKKPVNLYCCWTFLLASCCSLTDCYNLDVDHPVSFSGPNGSLFGYSVLLHKNKQHTWL
IVGAPVANSTFDPTLIKPGAIYKCNFSGNRECQQISTGVDSCGKTCFSESDNQWLGVSLS
RQPSDGHVLACGHRWKNVFYSRKDNQNKLPHGVCYRYEADLKQSQPLIPCYKDHQRKFGE
DYGSCQAGISNFLNEDLIIMGAPGTSYWTGSVLVYNTSSMVLSAYVDDDSTVLYGSYLGY
SVGAGHFLHPDSTEIVGGAPQHRQTGKAYLFRAEENMLKIISEVKGSKLGSYFGASVCAV
DLNGDGLSDLLVGAPMYSTTREEGRVHVYINQGAANMKEAEFQLAGSKSYAARFGETITD
LGDIDDDGFPDVAVGAPQEEELRGAIYIYNGRKTGISQTYSQRITGSLLGNELKMFGQSV
SGGIDVDGNGYQDVAVGAFLSDSAVVLRTRPVVVVEASMPLPVSVNRSVALCSDNGLPAV
CINVTVCFRVRARRYNGLIELQYNLTADTHHKESFPSRFHFHGNGTSNVTTGQVKARHDQ
LTCITHQAFMRKDVRDIFTPIHFEATYALRQHPVHTWGFRIFPALKPILQQRGGHSNLVA
NKTEFARYCSLANCSTNLQVSAYLVLPQKHNNIQYFALGNGKTIMLNTTLVNAGDDAFLP
RLQLRFPSNLHYIKVLDAKEKYVSCDISEENKTIVGMDCSVGNLYFSSGAKVNISFLLDV
NQSSSAGDISISINTFGDNSENEDLLHDNSATLMLPLRYGVDVSVHGFVTPTSFVFGDQE
PTPVDCYTETFNYTYKVVNIGPSKSLNTEVEIDIPKILSPYPYRLLHIADFQTSLGECSI
KNGSITVEDDCEVPRSSLIKELVFFFSKTSKRKMFCAHGDDLCLTLVCRLGDMDIGKEAT
IQMEVKLNPTVLQLTPGRHGVMLIESTGIITSPREDPHTILLQQTPIAQVVLEAHFNQKP
QAAVEGFIIVGSLLVGLLILALLIFALWKAGFFKRQFKKEIRRDSWDYVPKSEKTESIS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaagaagccggtgaatctttattgctgttggacctttcttctcgcttcgtgc
tgtagtctcactgactgttacaatttggatgtagaccatccggttagtttcagtggccca
aatggatctttatttggatattctgtgttgttacataagaacaagcaacacacatggtta
atagtcggagctccagttgcgaattcaacattcgatccaacccttataaaaccaggagca
atttataagtgcaacttctcaggcaatagagaatgtcagcaaatatcaacgggtgtggac
agttgtgggaagacttgcttctctgaaagtgacaaccagtggctcggagtcagcctgtct
agacagcctagtgatggccatgtattggcatgtgggcatcgttggaagaacgtgttctat
tccaggaaagacaaccagaacaagctgcctcatggtgtctgctacagatacgaagctgac
ctcaaacagtctcaaccacttatcccatgctataaagatcatcaacggaagtttggtgaa
gactacggatcatgccaagcaggaatatccaactttctgaatgaggacttgataataatg
ggagcccctgggacatcgtactggactgggtctgttctggtctacaacacctccagtatg
gtcctgtctgcctatgtggatgacgacagcactgtactctatggcagttatctgggctac
tcggttggcgccggccacttccttcaccctgactccacagagatcgttggaggtgcaccc
cagcacaggcagactggtaaagcctacctattcagagctgaagaaaacatgctgaagatc
atcagtgaagtcaagggaagcaagctgggctcgtattttggtgccagtgtgtgtgccgtg
gacctgaatggagatggcctgtctgatctactggtaggagctcccatgtacagcaccacg
agagaggagggccgagtccatgtctacatcaaccaaggagctgctaatatgaaggaagca
gagtttcagttggctggaagcaaatcgtatgctgcaagatttggggagaccataaccgat
ctgggagatattgatgacgatggctttcctgatgtggcggtgggggctccgcaggaggaa
gagctgcgtggggctatatatatctacaatgggaggaagacagggatctctcagacctac
tctcaaaggatcaccgggtctcttctgggtaatgagttaaagatgttcggccagtctgtt
tccggaggcatcgatgttgacggaaacggttaccaagacgttgcggtaggggccttcctc
tcagactccgctgtggttctgaggacacgtccggtggtagtggttgaggcctccatgccc
cttcctgtcagtgtgaaccgctctgtagcgctgtgttctgacaacggtcttcctgctgtc
tgcatcaacgtgacagtctgcttcagggtccgcgctcgacgctacaacggactcatagaa
ctgcagtataacctgacagccgacactcaccacaaggagtctttcccctcccgcttccat
ttccacggcaacgggacgtccaacgttacgacagggcaagtcaaggccagacacgaccag
ctgacctgcatcacccaccaggccttcatgaggaaagatgtccgggatatcttcacgccc
atccattttgaggcaacgtacgccctcagacagcaccctgtccatacctggggattcaga
atattcccagccctgaaacccatcctgcagcagagaggggggcacagcaacctggtagcc
aataagactgagtttgctcggtactgttcattggccaactgttcaaccaatctgcaggtc
tctgcatacctggtcttaccacagaaacacaacaacatacagtactttgcattgggtaat
gggaagaccatcatgttgaacacaaccctggtgaacgctggagatgatgccttcctcccc
aggctccagttacgcttcccctccaacctgcactacatcaaagtccttgatgcaaaggag
aagtatgtgagctgtgacatttcagaggagaacaagacaattgtaggaatggactgtagt
gttgggaacctgtacttcagctctggagccaaggtgaacatcagctttctgttggatgta
aaccagagtagcagtgctggtgacattagcatatccatcaacacttttggagacaattct
gaaaatgaggatcttctgcatgacaactcagccactctgatgttaccgttgagatatggc
gtggatgtcagtgtccatgggtttgtgactccaacatcctttgtatttggtgaccaggaa
cctactccagttgattgctacacagagacattcaactacacttacaaggttgtcaatatc
ggtccaagcaaatctctcaacacggaagttgagattgatattcccaagatactatcacca
tatccatacagattactccacattgcagattttcagacctctcttggagaatgttccatt
aaaaacggctccatcacagtagaagatgattgtgaggtgccacggtcgtctttaatcaag
gaactggtcttcttcttctccaaaactagcaaacgcaaaatgttctgtgctcacggagac
gacctgtgcctgactctggtgtgtagactaggagacatggacattgggaaagaagccacc
attcagatggaagtgaagctcaaccccactgttctacagctcacaccgggtcgtcatgga
gtgatgctgatagagagtactggcatcatcacatcaccaagggaggaccctcacaccatc
ctattacagcagacccctattgctcaggttgtgttggaggcccacttcaaccagaagcct
caggcagcagtggaggggttcatcattgtagggagtctactggtgggactcctgatcctg
gccctgctcatcttcgccctctggaaggctggtttcttcaagaggcagtttaagaaagag
atcaggagggatagctgggactatgtaccaaagagtgagaagactgagagtatatcctaa
DBGET
integrated database retrieval system