Oncorhynchus kisutch (coho salmon): 109871390
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Entry
109871390 CDS
T09179
Symbol
pou2f1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X12
KO
K09364
POU domain transcription factor, class 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109871390 (pou2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109871390 (pou2f1)
03021 Transcription machinery [BR:
oki03021
]
109871390 (pou2f1)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109871390 (pou2f1)
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
109871390 (pou2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109871390
NCBI-ProteinID:
XP_020317835
Ensembl:
ENSOKIG00005013226
LinkDB
All DBs
Position
LG26:20200917..20223124
Genome browser
AA seq
672 aa
AA seq
DB search
MADGGAASQDESSGPGVQTNGLDFQRQTVQATNAITNAHAQALLQQLTLSPAQQQMFLQQ
AQAQLLAAAMQQQSASQQSSTTGASISASAATPITQLPLSQPVQITSQLQQLQQQNLTMP
QFVLVQPGHHIATQLQPGQFIISQTPQGQQSFLQAHNLLTQLPQSQANLLQTQPSINLAS
QPATPSHTIAATPIQPLSHSQTPPKRLDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQG
DVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLSSDLALSS
PCGLGSPGLGMEGLNRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITIIADQLNMEKE
VIRVWFCNRRQKEKRINPPSSGHSITGTGSTPIKTIFTPNSPLVASTASLVTSNTPTTLT
LNPVMPLTSTSVSGLTLTGTTIGATTNTASVISTAPMVTAVTSSTSLSPSPTALQATAAE
TDGTQEHTVVMQAPSSLATNLGTGQVMVAGPGLSAALQGAAQLPTSSSYASMAGLNPGLM
ASSQFTPGGAMLSLAPGGLGGAINPAMLSNSTLATIQGLWSALASGGTLPITSLDGSGNL
LFANTSAGSTPNLVQPLFLNPQNLSLLTSNPVSLVSAGAAGGGALQVTANHQVTTATVPV
PVSTITTASKAQ
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggaggagcagcgagtcaagatgagagttcaggaccaggagtccaaacgaat
ggactggactttcagaggcagacggtgcaggccacaaacgcaatcaccaatgcacatgca
caggctctgctccaacagttgaccctgtctccagcgcagcagcagatgtttttgcagcag
gcccaggcccagctcttggcagcagccatgcagcagcaatcagccagccagcagagcagc
accacgggggccagcatctctgcctccgcagccacccccatcacacagctgcccctgtcc
cagcccgtccagatcacctctcagttacagcagctgcagcagcagaatctaaccatgccc
cagtttgtcctggttcaacctggccaccacatcgccacccagctgcagcctggtcagttc
atcatctcacagacaccgcagggccagcagagtttcctgcaagcccataatcttctaact
caactacctcaaagccaagccaacctcctgcagactcagccaagcatcaaccttgcctca
cagccagcgactccatcccacacgatagcagccacgcccatccagcccctgtcccacagt
cagaccccgcccaaacgcctggacacacccagtctggaggagcccagcgacctggaggag
ctggaacagttcgctaagaccttcaaacagagacgcatcaaactgggcttcacacagggg
gatgttggcctggccatgggcaagctgtatggtaacgacttcagccagaccaccatttcc
cgcttcgaggccttgaacctcagctttaagaacatgtgcaagctgaagccacttctggag
aagtggctcaacgatgcagtttgtgcagagaatctgtcgtctgacctggccctgtccagc
ccttgcggcctggggtcccccggtctgggcatggaggggctcaaccgccgacgcaagaag
aggaccagcatcgagaccaacatccgcgtggccttagaaaagagctttctggagcagaac
caaaaacctacctctgaggagatcaccataattgctgaccagctcaacatggagaaggag
gtgatccgggtgtggttctgtaaccgtcggcagaaagagaagcggatcaacccccccagc
agcggacacagcatcacagggacaggcagcacccccatcaaaaccatcttcacccccaat
agccccttggtggccagtacggcgagccttgtgaccagtaacacaccaaccacactcact
ttaaacccagtgatgcctctcaccagcaccagcgtctccggcctgaccttgacaggcacg
acgatcggagcgaccacaaacacggcatctgtcatctctacggcacccatggttaccgct
gtgaccagctccacctcgctaagcccctcccccacggccctccaggccacggcagcggag
acggatggaacccaggagcacacggtggtcatgcaggcgccatcgtcactagcaaccaat
ctggggacaggtcaggtgatggtggctggaccggggctgtcagcggccctgcaaggagct
gcccagttacccaccagttctagttacgcctccatggctggccttaacccaggactgatg
gcatcctcacagttcactcctgggggggccatgctgagcttagctccgggtgggcttgga
ggggctataaaccccgccatgttgagcaacagcaccctggccaccatccaaggtctatgg
agcgctctggcatcgggtggcactctccccatcacctcgctggacgggagtggtaacctg
ctgttcgctaacacctcggccggcagcacccccaacctggtgcagcccctcttcctgaac
ccccagaacctgtccctgctcaccagcaaccccgtcagcctggtgtcggccggagccgcc
gggggaggggccctgcaggtcacagccaaccaccaggtcaccacggcgaccgtcccagtg
cccgtctccaccatcaccactgcctccaaggcccagtga
DBGET
integrated database retrieval system
