Oncorhynchus kisutch (coho salmon): 109871428
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Entry
109871428 CDS
T09179
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109871428
03015 mRNA surveillance pathway
109871428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109871428
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109871428
mRNA cycle factors
P-body specific factors
109871428
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
PagP
Motif
Other DBs
NCBI-GeneID:
109871428
NCBI-ProteinID:
XP_020317899
Ensembl:
ENSOKIG00005008319
LinkDB
All DBs
Position
LG26:3687167..3712464
Genome browser
AA seq
527 aa
AA seq
DB search
MVCDYREDAHRINTAAPALAELFSLELSRGENDFHRRGRKMRSETDQMTGGREESVVEIQ
FRDIPRGQDAVSVNSKQKEEKKEVFTKVVIRRLPPNLSKDQLEEQLSPLPSYDYFEFFPA
DQSLYPHLFSRVYINFRNPEDILLFRDRFDGYVFIDNKGQEYPAVVEFAPFQKVSKKKLK
KKDSKAGSIEEDPEYRRFLENYSCDEEKSMANPETLLGEIEAKTKKLIAKRTTPLLEYIK
NKKLEKHRIREEKREERRRRELEKKRQREEEKRKRREEERRKRKEADKQKKLSEKEIKIK
LLKKSDWDDDVDSDRLKDKGDSGDTERAKWDKPSGHMKSKEIKDPGQMESDKEQREHNRR
QRDKDHRGRDEERKRQRHHYEFDKSMRCKEDTKWGKGYCQDRAKKDGQYHSSYSYDTCDK
VGKEVREDIGGSRKDRVRNKVSDKSVLAYQDRRTSQSEGPHQIRGALPNKDRPAMQLYQP
GAHNRKRVSSAMKGYELPMNRSPEHAAADHCYEAVAMETGSEKSGDE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtgattaccgagaagatgcgcaccgcataaacacagcagcaccagctctagca
gagctcttcagcttggaactctcgcgaggggaaaatgacttccacaggagagggagaaag
atgaggtctgaaacggaccaaatgaccgggggcagggaggaaagtgtcgtcgaaatacaa
ttcagagatattccgaggggacaggacgccgtctccgtcaactcaaagcagaaagaagag
aagaaggaggtctttactaaggtagtaataaggcgacttccacccaacctgtccaaggac
cagctggaagaacagctcagtcctcttccatcctatgactactttgagtttttccctgct
gatcaaagcctctatccacacctgttctccagagtttacattaacttcagaaaccccgaa
gacatcctgctcttcagagaccgctttgatggctatgttttcattgataacaaaggccag
gagtacccagctgtggtagagtttgccccctttcagaaagtctccaagaagaagctcaaa
aagaaagattccaaagctggaagcattgaagaagacccggagtaccggcggtttctggag
aactactcctgtgatgaggagaagtccatggccaaccccgaaaccctgctgggagagata
gaggccaagacaaagaaactcatagccaaaagaacaacacctcttctggagtacatcaag
aataagaaacttgagaagcacaggataagagaggagaagagagaggagcgtcgacgcagg
gagctggagaagaaacggcagagggaggaggagaagaggaaacggagggaggaggagaga
cgcaaacgcaaggaggcggataaacagaagaaactatcggagaaggagatcaagatcaag
ctcctgaagaagagtgactgggacgatgatgtggactctgacaggctcaaggacaaagga
gacagtggggacacagagagggccaagtgggacaaacccagtggacacatgaagtcaaag
gaaatcaaggacccgggtcagatggagagcgataaggagcagagagagcacaaccgcagg
cagagagacaaagaccacagaggaagagacgaggagaggaaacgacagcgccaccactac
gagttcgacaagtccatgcggtgcaaggaggataccaagtggggtaaaggctactgccag
gaccgggcaaagaaagatggccaataccacagctcctactcctacgacacgtgcgacaag
gtgggcaaggaggtcagagaggacattggcggtagcaggaaggaccgcgtccggaacaag
gtgagcgacaagtctgtgttagcctatcaggacagaaggacgtcccagtcagaggggcca
caccagatacgaggggctctgccaaacaaggaccggcctgccatgcagctctaccagcca
ggcgctcacaatcgcaagcgcgtgagctctgcgatgaaaggttatgagcttcccatgaac
cgctcgccagaacacgcggcggcggaccactgctacgaggccgtcgccatggaaacgggc
tcggaaaagagcggagacgagtag
DBGET
integrated database retrieval system
