KEGG   Oncorhynchus kisutch (coho salmon): 109871499
Entry
109871499         CDS       T09179                                 
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
  KO
K16499  protocadherin delta 2
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    109871499 (pcdh8)
Cell adhesion molecules [BR:oki04515]
 Cadherins
  Protocadherins
   109871499 (pcdh8)
SSDB
Motif
Pfam: Cadherin Cadherin_2 TMEM154
Other DBs
NCBI-GeneID: 109871499
NCBI-ProteinID: XP_020317983
Ensembl: ENSOKIG00005050720
LinkDB
Position
LG27:complement(10476598..10480602)
AA seq 1006 aa
MGMRGWNWWVLVCTSLAVLPALTEGKTVKYETFEEDAPTTVIGNLAKDISISPSSGSKTN
FRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLIAFDVVSFSKEQFKLIHVEV
EVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGLNYIQSYQISVNSHFTID
VLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGTTRINVKVKDYNDNSPV
FDRNNFSVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGNQVPSEIRQLFRVDRKTGR
LTLESPIDFESKKTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSITAG
IAYITESAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDR
EQIPEYNLTVVAEDLGSPPFRTITQYTIRLMDENDNAPVFSKPVYEVAVVENNAPGAYIT
TVVARDMDLGHNSKVSYKLADAYVMGSPVSAFVSLDPASGSLYALRSFNYEVMKQLELRI
TASDGGSPPLTGTSTVNIRIVDQNDNAPVINQPVLNNGSAEVLLPRDAPSGYVITRVEAQ
DADEGLNAELSYRLAFGEASVFSVNKATGEVYLNRVLSHGVDETLRVTVTVSDNGRPALT
TTATLHFLIIAGTPPSDRTVYRAGSREAGEHTQWDLSVVIIIVLAGSCTLLLLAIILIAT
TCSRRKRDKTGDDTDSYGEKETLERGKNNGDNPLLPLHGVVGGFEAHTFSNQPGFSGEHT
GSSDLCSASEDGSEAPCVYEPDSKPKGYSTLPGYGNGYNNGKEVVRPITIWKGNSYTTIS
ARDPAFSGKDSGKGDSDFNDSDSDISGTDLKKEGAPVPPMGGQSGLWACTSECKILGHSD
RCWSPSTVHANTGPSPVPTPTGQTLSSFNSLSKTASLPRDSLRRDNYYQAHIPKTTGLQS
VYEKVLHREYDYVLVTPPIPMRVQEISEITIPVYGPTTTRCPSNEV
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgggaatgagagggtggaattggtgggtgctggtgtgcacctcgctggctgtcctgccc
gctctcacggagggaaagacggtgaagtatgagacatttgaggaggacgccccgacgact
gtcatcggaaacttggccaaggacatttcaatcagcccctcctcgggctccaagacaaat
ttcaggatgatgaagcagttcaactcgtcttttatccgtttgagggagagcgacggccag
ctgactatcggagagagaattgacagagagagaatttgcaaacacacccttcactgcctc
atcgcatttgatgtggtcagcttctccaaagagcagttcaaactcatccacgtcgaggtg
gaggtcaaggacatcaacgacaattcccccgagttcccccggaaagagtcgagtctggag
atctccgaaaacacagctgtgggcacgcggatcccgttagacttcgctgtggatgaggac
gtgggtttgaattacatccagagctaccagatatccgttaacagtcacttcaccattgat
gtgctcagcagagccgacggggttaaatatgcggagcttgtgctcatgaaggagctggac
cgtgagacacaggcttcctatgcgctcgagctggttgctatggatggtggcaacccgtcc
cgcactggaacgactcgcatcaacgtcaaggtgaaagactacaatgacaacagcccggtg
ttcgacaggaacaatttctcagtcgacctccctgaggacgcaccggtagggtttctctta
ctggacctgaacgcagaagacccggatgaggggctgaatggggaggtggtgtatgggttc
ggtaaccaggtgccatcagagattcgacaacttttcagagtggatcgcaaaacgggacgc
ctcacccttgagagccccattgactttgaaagcaaaaaaacgtatgaattcgacgtccag
gcgactgacctgggtccaaacccgagcccggctatctgtaagatagtggtgcaggtgcag
gacgttaacgacaacgcgccagagatctccatcacgcctatgacctccatcacggcggga
atcgcctatatcacggagtctgcggcacgcgagagttttgttgctctagtcagcacctcg
gacagggactctggtgctaacggacaggtgcactgcacgctctacggccacgaccacttc
aggttgcagcaggcatacgaggacagcttcatgatcgtgagcacaagcccgttggaccgg
gaacaaatccctgagtataatctaacagtggtggcagaggacttgggttccccaccattc
cggaccatcacccagtacaccatccggttaatggatgagaatgacaatgcccctgtgttc
agtaagccggtgtatgaagtggctgtggtggagaataacgcaccgggtgcttacatcacc
acggtggtcgccagggacatggacttgggccacaacagtaaggtgagctacaagctcgct
gacgcctatgtcatgggctctccagtgtccgcttttgtctcactggaccccgcgagtggc
tccctttatgcactcaggagcttcaactatgaagtcatgaaacagctcgagctccgcatc
acagccagcgacggtgggtccccgcctctcaccggaacctcgaccgttaacattaggata
gtggaccaaaacgacaacgcacctgtcatcaaccagcccgtgctcaataatgggtccgcg
gaggttctgctgccccgggatgcgccctcaggctacgtcatcacccgggtggaggcgcaa
gatgctgatgagggcttgaatgcagagctgtcctacagacttgcctttggagaggcatcc
gtgttctccgttaacaaagccaccggagaggtctacctcaaccgcgtgctcagtcacggc
gtggacgagaccctgcgcgtgaccgtcacggtgagtgacaacgggagacctgcgctcacc
accaccgccacgcttcacttcctcatcattgcgggcacccctccgagcgacaggaccgtg
taccgggcaggcagcagggaggcaggggagcacacacagtgggacctgtcagtggtgatt
atcatcgtcctcgcggggagctgcacgctcctgctgttagccatcatcctcatcgccacc
acctgcagccggcggaaacgggacaagactggagatgacaccgactcgtacggggagaag
gagactctggaaagaggcaaaaacaacggcgacaaccctctgctgccgctccacggagtc
gtgggagggtttgaagcccacaccttctcgaaccagcctggtttttccggggaacacact
ggtagcagtgacctgtgctctgcctcagaagatgggagcgaggccccgtgcgtttacgaa
ccggacagcaaacccaagggctactccactctgcccggctacggaaacggctacaataac
ggtaaagaagtggtcagaccaatcaccatctggaagggcaactcctacaccaccatctcc
gcaagagaccccgcattcagcgggaaggacagcgggaaaggcgacagtgactttaacgac
agtgatagtgacatcagtggcaccgacctgaagaaggagggagcaccggtaccccccatg
ggtggccagagtggtctatgggcgtgtaccagtgagtgtaagattctgggtcattctgac
cgctgctggagcccttccactgtccacgctaacaccggtccctcgcccgtccccaccccc
accggccagactctctcctccttcaacagtctctccaagacggcctcgctgccccgagac
tcgctccggcgggacaattattaccaggcgcacatccccaaaacaaccggcctgcagagt
gtgtatgagaaggttctgcatagagaatatgactatgtcctggtcactcctccaataccc
atgagagttcaggagattagtgaaatcacgatcccagtctacggtccgaccaccacacgg
tgtcccagcaatgaagtctag

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