Oncorhynchus kisutch (coho salmon): 109871499
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Entry
109871499 CDS
T09179
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109871499 (pcdh8)
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109871499 (pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
109871499
NCBI-ProteinID:
XP_020317983
Ensembl:
ENSOKIG00005050720
LinkDB
All DBs
Position
LG27:complement(10476598..10480602)
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AA seq
1006 aa
AA seq
DB search
MGMRGWNWWVLVCTSLAVLPALTEGKTVKYETFEEDAPTTVIGNLAKDISISPSSGSKTN
FRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLIAFDVVSFSKEQFKLIHVEV
EVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGLNYIQSYQISVNSHFTID
VLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGTTRINVKVKDYNDNSPV
FDRNNFSVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGNQVPSEIRQLFRVDRKTGR
LTLESPIDFESKKTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSITAG
IAYITESAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDR
EQIPEYNLTVVAEDLGSPPFRTITQYTIRLMDENDNAPVFSKPVYEVAVVENNAPGAYIT
TVVARDMDLGHNSKVSYKLADAYVMGSPVSAFVSLDPASGSLYALRSFNYEVMKQLELRI
TASDGGSPPLTGTSTVNIRIVDQNDNAPVINQPVLNNGSAEVLLPRDAPSGYVITRVEAQ
DADEGLNAELSYRLAFGEASVFSVNKATGEVYLNRVLSHGVDETLRVTVTVSDNGRPALT
TTATLHFLIIAGTPPSDRTVYRAGSREAGEHTQWDLSVVIIIVLAGSCTLLLLAIILIAT
TCSRRKRDKTGDDTDSYGEKETLERGKNNGDNPLLPLHGVVGGFEAHTFSNQPGFSGEHT
GSSDLCSASEDGSEAPCVYEPDSKPKGYSTLPGYGNGYNNGKEVVRPITIWKGNSYTTIS
ARDPAFSGKDSGKGDSDFNDSDSDISGTDLKKEGAPVPPMGGQSGLWACTSECKILGHSD
RCWSPSTVHANTGPSPVPTPTGQTLSSFNSLSKTASLPRDSLRRDNYYQAHIPKTTGLQS
VYEKVLHREYDYVLVTPPIPMRVQEISEITIPVYGPTTTRCPSNEV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgagagggtggaattggtgggtgctggtgtgcacctcgctggctgtcctgccc
gctctcacggagggaaagacggtgaagtatgagacatttgaggaggacgccccgacgact
gtcatcggaaacttggccaaggacatttcaatcagcccctcctcgggctccaagacaaat
ttcaggatgatgaagcagttcaactcgtcttttatccgtttgagggagagcgacggccag
ctgactatcggagagagaattgacagagagagaatttgcaaacacacccttcactgcctc
atcgcatttgatgtggtcagcttctccaaagagcagttcaaactcatccacgtcgaggtg
gaggtcaaggacatcaacgacaattcccccgagttcccccggaaagagtcgagtctggag
atctccgaaaacacagctgtgggcacgcggatcccgttagacttcgctgtggatgaggac
gtgggtttgaattacatccagagctaccagatatccgttaacagtcacttcaccattgat
gtgctcagcagagccgacggggttaaatatgcggagcttgtgctcatgaaggagctggac
cgtgagacacaggcttcctatgcgctcgagctggttgctatggatggtggcaacccgtcc
cgcactggaacgactcgcatcaacgtcaaggtgaaagactacaatgacaacagcccggtg
ttcgacaggaacaatttctcagtcgacctccctgaggacgcaccggtagggtttctctta
ctggacctgaacgcagaagacccggatgaggggctgaatggggaggtggtgtatgggttc
ggtaaccaggtgccatcagagattcgacaacttttcagagtggatcgcaaaacgggacgc
ctcacccttgagagccccattgactttgaaagcaaaaaaacgtatgaattcgacgtccag
gcgactgacctgggtccaaacccgagcccggctatctgtaagatagtggtgcaggtgcag
gacgttaacgacaacgcgccagagatctccatcacgcctatgacctccatcacggcggga
atcgcctatatcacggagtctgcggcacgcgagagttttgttgctctagtcagcacctcg
gacagggactctggtgctaacggacaggtgcactgcacgctctacggccacgaccacttc
aggttgcagcaggcatacgaggacagcttcatgatcgtgagcacaagcccgttggaccgg
gaacaaatccctgagtataatctaacagtggtggcagaggacttgggttccccaccattc
cggaccatcacccagtacaccatccggttaatggatgagaatgacaatgcccctgtgttc
agtaagccggtgtatgaagtggctgtggtggagaataacgcaccgggtgcttacatcacc
acggtggtcgccagggacatggacttgggccacaacagtaaggtgagctacaagctcgct
gacgcctatgtcatgggctctccagtgtccgcttttgtctcactggaccccgcgagtggc
tccctttatgcactcaggagcttcaactatgaagtcatgaaacagctcgagctccgcatc
acagccagcgacggtgggtccccgcctctcaccggaacctcgaccgttaacattaggata
gtggaccaaaacgacaacgcacctgtcatcaaccagcccgtgctcaataatgggtccgcg
gaggttctgctgccccgggatgcgccctcaggctacgtcatcacccgggtggaggcgcaa
gatgctgatgagggcttgaatgcagagctgtcctacagacttgcctttggagaggcatcc
gtgttctccgttaacaaagccaccggagaggtctacctcaaccgcgtgctcagtcacggc
gtggacgagaccctgcgcgtgaccgtcacggtgagtgacaacgggagacctgcgctcacc
accaccgccacgcttcacttcctcatcattgcgggcacccctccgagcgacaggaccgtg
taccgggcaggcagcagggaggcaggggagcacacacagtgggacctgtcagtggtgatt
atcatcgtcctcgcggggagctgcacgctcctgctgttagccatcatcctcatcgccacc
acctgcagccggcggaaacgggacaagactggagatgacaccgactcgtacggggagaag
gagactctggaaagaggcaaaaacaacggcgacaaccctctgctgccgctccacggagtc
gtgggagggtttgaagcccacaccttctcgaaccagcctggtttttccggggaacacact
ggtagcagtgacctgtgctctgcctcagaagatgggagcgaggccccgtgcgtttacgaa
ccggacagcaaacccaagggctactccactctgcccggctacggaaacggctacaataac
ggtaaagaagtggtcagaccaatcaccatctggaagggcaactcctacaccaccatctcc
gcaagagaccccgcattcagcgggaaggacagcgggaaaggcgacagtgactttaacgac
agtgatagtgacatcagtggcaccgacctgaagaaggagggagcaccggtaccccccatg
ggtggccagagtggtctatgggcgtgtaccagtgagtgtaagattctgggtcattctgac
cgctgctggagcccttccactgtccacgctaacaccggtccctcgcccgtccccaccccc
accggccagactctctcctccttcaacagtctctccaagacggcctcgctgccccgagac
tcgctccggcgggacaattattaccaggcgcacatccccaaaacaaccggcctgcagagt
gtgtatgagaaggttctgcatagagaatatgactatgtcctggtcactcctccaataccc
atgagagttcaggagattagtgaaatcacgatcccagtctacggtccgaccaccacacgg
tgtcccagcaatgaagtctag
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