Oncorhynchus kisutch (coho salmon): 109871524
Help
Entry
109871524 CDS
T09179
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109871524
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109871524
Transporters [BR:
oki02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109871524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109871524
NCBI-ProteinID:
XP_020318004
Ensembl:
ENSOKIG00005016096
UniProt:
A0A8C7GGW5
LinkDB
All DBs
Position
LG3:complement(18199934..18218036)
Genome browser
AA seq
593 aa
AA seq
DB search
MTRQDSAAPAGSLSVQGPSNPGYNTNPVPVPVITQTDTRDKWSKKMDFLLSVIGFAVDLG
NVWRFPYICYQNGGGAFLIPYIVMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKG
IGYAICVISLYVSFYYNTIIAWALFYFYSSFASVLPWTNCDNAWNTENCTNYFLKDNVTW
NNYSRSPAEEFYTRNVLEIHKSDGLSNVGGVRWQLMLCLFLIFTIVYFSLWKGVKTSGKV
VWVTATLPYVVLFILLIRGATLPGAWKGVVFYLQPKWEKLFETSVWVDAAAQIFFSLGPG
FGVLLALSSYNPFTNNCYRDAIVTSLVNCLTSFMSGFVIFTMLGYMAEKRNVNVEDVARD
KGPSLLFITYPEAIANMTGSTFFAIIFFVMMITLGLDSTFGGLEAIITAVMDEYPEYLAH
RRELFVLGLVVVCFLGSLSTLTNGGAYVVKLLEEFGVGSSIIAVGFLEAIAVSWFYGITR
FSNDIKSMLGYYPGLFWKVCWVAISPAFLAYIIVSSLLKPAPLQLFDYKYPDWSITVGYI
IGASSFMWIPIYMVYKLVWTPGSLKQRLAVCLRPERTIMPEIHTDSLNMSTVP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccaagactcagcggccccagcgggaagcttgagcgtccagggcccctcaaac
cccggttacaacaccaaccctgtgccggtacctgtgatcacacagacggacacacgagac
aaatggagcaaaaagatggattttcttttatcagtcattggcttcgcggtagacttggga
aatgtgtggagatttccatacatttgttaccaaaacggaggcggggctttcctaatcccc
tacattgtcatggcgatttttggaggggtgccactcttttacatggaactggcactggga
cagttccacagaactggtgccatatccatatggaaacacatatgccccatcttcaaaggc
attgggtatgcgatctgtgtcatctcgctctacgtctcattctactacaacaccatcatc
gcctgggcactcttctacttctactcgtccttcgccagcgtcctgccctggaccaactgt
gacaatgcctggaacactgaaaactgcaccaactacttcctgaaagacaacgtgacctgg
aataactactccaggtcacctgctgaggaattttacacgaggaatgttctggaaatccac
aagtccgatgggctgagtaacgtggggggtgttcgctggcagctgatgctctgcctcttc
ctcatcttcactatcgtttacttcagtctctggaagggagtgaagacatcagggaaggta
gtgtgggtgacagccaccttgccctatgtggtgctcttcatcctgttgattcgtggtgcc
accctaccaggtgcatggaagggagtggtcttctacctccagcccaagtgggagaaactc
ttcgagaccagtgtgtgggtagatgctgcggctcagatcttcttctccttggggccaggc
tttggggtactccttgccctctccagctacaaccccttcaccaacaactgttatcgtgac
gccatagtgaccagcctggtgaactgcctgaccagcttcatgtctgggtttgtgatcttc
actatgctggggtacatggcagagaagagaaatgtgaatgtggaggatgtggccagagac
aaaggtccaagcctactcttcatcacatatccagaggccatagccaacatgacaggatca
acgttcttcgccattatcttcttcgtgatgatgatcactcttgggcttgacagcacgttc
ggaggactggaggctatcattactgctgtgatggatgaataccctgaatacctggcacac
agacgggagctgtttgtactgggcttggtcgttgtgtgctttttgggctccctcagcact
cttaccaatggtggggcctatgtggtgaaactgctggaggaatttggggtgggttcctcc
atcattgctgttggttttcttgaggccatcgctgtttcctggttctatggtatcacaaga
ttcagcaatgacattaaatccatgttaggctattatcctggattattctggaaggtgtgc
tgggtggctattagtcctgcatttctagcgtatataatagtgagctccctgctcaagcca
gcgcccctccaactctttgactacaagtacccagactggagcattacggtgggctacatc
atcggtgcctcatccttcatgtggatccccatctatatggtctacaagctggtgtggacc
cccggatcactgaaacagcgcctagctgtgtgtctgagacctgagaggaccattatgcca
gagatccacacagactccctcaacatgagtactgttccatag
DBGET
integrated database retrieval system
