Oncorhynchus kisutch (coho salmon): 109871525
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Entry
109871525 CDS
T09179
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109871525
04020 Calcium signaling pathway
109871525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109871525
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109871525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
109871525
NCBI-ProteinID:
XP_031662994
Ensembl:
ENSOKIG00005016638
LinkDB
All DBs
Position
LG27:15577513..15656891
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AA seq
2192 aa
AA seq
DB search
MALTPFEWVILATITANCIVLALEQHLPGEDKTPMAKRLECTEPYFIGIFCFEFGIKLVA
LGFVFHKGSYLRNGWNIMDFIVVVSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIP
SLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCLPTADILENETMDT
AEVEFACGVRKCPEKYDCIGSWIGPNNGITQFDNILFAVLTVFQCITMEGWTAVLYNTND
ALGSMWNWMYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVEREL
NGYRAWIDRAEEVMLAEENKNSGRSALDVLKRATSKNAKHRGGPGDAEISTIGAPRMRIR
TVRRGPVAYIRRKERMLRISLRRMVKTDTFYWTVLSLVALNTICVAIVHHNQPEWLSTFL
YYAEFVFLGLFLAEMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMSFGI
SVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLIFLFIVVFALLGMQLFGGR
FIFEDYTPANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLF
GNYTLLNVFLAIAVDNLANAQELTKDEEEEEEFFNARYARGRDGPMSERRRRPYLRRKKA
IHRGRMAVPEEEEESGAPGGADQPPNGANAFSNRRDRRRRGGGGGGGGGGRGGRSVWEQR
ANQLRKRRQMESQEVLFGGSPTEDNTDNPTTAYRAPTRSPDTSPGHLPESPMSGIMPMPE
PPMSIAIRLPEPPDSEPRPLFTLVEERAVHHRPAGGDRRHRVARKFRPGLGGAEEGGVAR
HRRHRHREARAEAKSRESPHEEVRESGSRERKILEEREEKEEKEEKTDKGQVAVVEGGVS
GQEEGASIVNLESEEEHLRVCIADIPEPPLCDDFPESLPPPLLDPPPQMEEGEVGETGQC
EPLSQDPPLEPAPEQFTDPPELQAASGVKDSENNPASLNREEGEGPGQVLDSQTSVIIEM
SGEQPLLEIIPLTALHNNKEMEVYQPERMEKEKEKEEREAQEENSPPKPVPPDSMFLFKA
SNPIRRICHYVVTMRYFEMTILLVIVASSIALAAEDPVCTNSDRNRVLRYFDYVFTGVFT
FEMIIKMIDLGLLLHDGSYFRDLWNILDFIVVVGALFAFALTNVIGNNKGRDIKTIKSLR
VLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYC
TDSSMDTEKECQGYYIDYARDKKEVKKREWKRHEFHYDNVCWALLTLFTVSTGEGWPQVL
QHSVDVTEEDRGPSRGNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECS
LEKNERACIDFTISAKPLTCYMPQNRQTFQYRLWHFVVSPSFEYTVLVMIALNTVVLMMK
YNSAPAAYDTVLKHLNTAFTVLFSLECILKIMAFGFVNYFRDTWNIFDFITVLGSITEII
VDLQSINTFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIY
AIIGMQVFGNIKLNDENHINQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQECEPD
SSMAPMTMSPDHEGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGP
HHLDEFVRVWGEYDRAACGRIHYTAMYEMLTHMSPPLGLGKKCPRGMAYKRLVLMNMPVD
EDMSVHFTSTLMSLIRTALEIKIARGQGMSGEDRVALDTELQKEISVIWPYLPQKTLDVL
VPINKDSDMTVGKIYASMMIMDYFKQNKAKKLRAQLEAQKASLMPFKRLDASTLSEDILY
NAHPLPCMSLSAGSALTRGGLVALSPLSQDLFAMTSDQDTSSQHSRTEMASGSIKRSSST
VADQRVNGLWQEEKKSPDRLYRPRHKSYKAAVSRSERKRQLDTEKERGRSKERRHLLSPD
TSRCNSEERSLQPSCSPSLERTHTLDKQGNSSDSPIPTSESSTPSRRPLSQTPTRSHPHI
SYSPLVCRTHPPSGDDDDDRGSPETQRWGEASREAGGEEQTGPRGRRHHHQQGSPLRRYP
SEPYLTLQEDEHSPDPSRFMETLTFEAAVATSLGRANTVSSSSSSSSSFSSARRGSRSGW
QIPNGHFRKRLAQTVSVAGCEPLSDTEEDGRC
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atggcccttacaccgtttgagtgggtgatcctggcaaccatcacggccaactgcatcgtt
ctggccctggagcaacatcttcctggggaggacaagactcccatggccaaaagactggag
tgtactgagccttacttcatcgggatcttctgctttgagtttggcatcaagctggtggcc
ctgggctttgtgttccataaaggctcctacctgaggaatggatggaacatcatggacttc
atcgtggtggtcagcggaatactggcaacagcaggggcccacatgaacataccagtggat
ctgcggaccctgagggcggtgagagtcctgaggccccttaaattggtctctgggataccc
agcttgcagatcgtgctgaagtccatcatgaaggccatggtgcccctgctccagatcggt
ctgctcttgttctttgccattcttatgttcgccatcatcggcctggagttctacagcggg
aagctccaccacacctgtctacctacagctgacatcctggaaaatgagacgatggatacg
gccgaggtggagtttgcctgtggagtgaggaagtgtccggagaagtatgactgcatcggg
tcatggattggccccaacaacggcatcacccagtttgacaacatcctgttcgctgtgctc
actgtcttccagtgcatcaccatggaggggtggacagctgtactctacaataccaacgat
gccttgggctctatgtggaattggatgtactttattcctctcatcattattggctcattc
ttcgtactcaacctggtgttgggagtcctctctggggagtttgccaaagagagggagcgg
gtggagaacaggagagccttcatgaagctgagacgtcaacagcaggtggagagagaactc
aatggatacagagcctggatagaccgagcagaggaggtgatgctggctgaggagaacaag
aattcagggagatctgctttagatgtgctgaagcgggccaccagtaaaaatgctaagcat
agaggaggtcctggggatgcagagatctccactataggagcacctcgtatgcggatccgt
acagtgcggcgtggcccggtggcgtatatacgccgtaaggagcgtatgctgcgtatctcc
ctgcggcgcatggtgaagaccgacaccttctactggaccgtcctcagcctggtggctctc
aacaccatctgtgtggccatcgtacatcacaaccagcccgaatggctctccaccttcttg
tactatgcggagtttgttttcctggggctctttttggcagagatgttcttaaagatgtat
ggcctgggattccgcctctatttccactcctccttcaactgcttcgactgtggagtgata
gttggcagcatctttgaggtggtgtggggcttcttccggcctggcatgtcctttggcatc
agcgtcctgagggcactgagactcctgaggatctttaagatcaccaagtattgggcatct
cttaggaacctggttgtgtctcttatgagttccatgaagtccatcatcagtctgctcttc
ctcatcttcctcttcatcgtcgtcttcgccctgctgggcatgcagctctttgggggcagg
ttcatctttgaagattacactcctgccaactttgacacgtttccagctgctatcatgaca
gtgttccagattctgactggtgaggactggaatgaggtgatgtacaatggcatccgctcc
caaggaggagtgcagtacggcatgtggtcctccatatacttcatagtgctcaccctgttt
gggaactatactctactcaatgtcttcttggccatcgctgtggataaccttgccaacgca
caggaactcaccaaggacgaagaggaggaagaggagtttttcaatgcaagatacgccaga
ggcagagatggcccgatgtctgagaggaggaggaggccctatctccgcaggaagaaggcc
attcacaggggccgtatggccgtccccgaagaggaggaggagagcggcgccccgggcgga
gctgaccagccccccaatggggccaacgccttctccaaccgccgtgacagacggaggagg
gggggaggaggaggaggaggaggaggaggaagaggcggaagatctgtgtgggagcagagg
gccaaccagttacgcaagcggcgccagatggagagccaggaggtgctgttcggaggcagc
cccaccgaggacaacactgacaaccctaccaccgcctaccgtgcacccacccgttcccca
gacaccagtcccggacacctgcccgagtcgcccatgtccggaatcatgcccatgcctgaa
cccccgatgtccatcgccatccggctgccggaacctccagactctgagcctaggcctctg
tttacattggttgaggagagagcagtgcaccatcgacccgccggtggggacaggaggcac
agggtggcccggaagttcaggcctggccttgggggggcggaggagggaggggtggctcgg
cataggaggcaccgtcatcgtgaggcccgggctgaggccaagagcagagagtccccacat
gaggaggtcagagaatcaggcagcagagagaggaagatactagaagagagggaggagaaa
gaagaaaaagaggagaagacggacaaaggacaggtcgctgtggtggagggaggagtgtcg
ggccaggaagaaggagccagcattgtcaacttagagagtgaagaagagcatctgagagtg
tgtattgcagacatccccgagcctcctctatgtgatgacttccctgagtccctaccccca
cccctgttggaccctccaccccagatggaggagggcgaggtgggggaaactgggcagtgt
gagcccctgtctcaggaccctccattggagccagccccagaacagttcacagacccccca
gagctccaagctgcatccggggtcaaagattcagagaacaacccagcctccctgaaccgt
gaggagggtgaggggccaggccaagtcctagacagccagactagtgtgatcatagagatg
tctggagaacagccactgctggagatcatccctttgacagctttacacaacaacaaagag
atggaggtgtaccagcctgaaaggatggagaaggagaaggaaaaggaggagagggaagcg
caggaggagaacagcccgcccaaacctgtacctcctgacagcatgttcctcttcaaggcc
tctaatccgatcaggaggatctgtcactatgtggtgaccatgcgctactttgagatgacc
atcttgctggtgatcgtggctagcagcatcgctctggctgctgaagaccctgtgtgcacc
aactctgacagaaacagggttctccgttactttgattacgtctttactggagtcttcact
tttgaaatgatcataaagatgattgacctgggcctgcttctgcacgacggctcctacttc
cgtgacctgtggaacattctggacttcatcgtggtggtgggagctctgttcgccttcgct
ctgacgaatgtgattgggaacaacaaaggcagagacatcaagaccatcaagtccctcagg
gttctgagagtcctacgacctctgaagaccatcaagagactccccaaactcaaggcagtg
tttgactgtgtggtgacatccctgaagaacgtcttcaacatcctcatcgtctacaagctc
ttcatgttcatcttcgctgtcatcgccgtgcagctcttcaagggaaagttcttctattgc
acagacagctccatggacacagagaaggagtgccaaggttattacatagactacgctcga
gacaagaaggaagtgaagaagagggagtggaagagacatgagttccactatgacaatgtc
tgctgggctctgctcaccctcttcactgtttccactggagagggctggccgcaggtcctg
cagcattctgtggatgtgacagaggaggacaggggtccaagtcggggcaacaggatggag
atgtccatcttctacgtcgtctactttgtggtcttccctttcttctttgtcaacattttt
gttgctctcatcatcatcaccttccaggagcagggggataagatgatggaggagtgcagc
ttggagaaaaatgagagggcatgcattgactttaccatcagtgccaagcccctgacctgc
tatatgcctcagaacagacagactttccagtaccggctgtggcactttgtggtgtcaccg
tcatttgagtacacagtgctggtcatgattgccctcaacactgtggtgctcatgatgaag
tacaactccgctccagcagcgtatgatacagtattgaagcacctgaacacagccttcacc
gttctcttctccctggagtgtatcctcaagatcatggcctttggttttgtgaactatttt
cgagacacttggaacatttttgatttcatcactgtgctcggcagcatcactgagatcatt
gtggacttacagtcaataaacacgttcaatatgagtttcctgaagctgttccgggctgcc
aggctgatcaagctgttgaggcagggctacaccatacggatactgctctggaccttcgta
caatcctttaaggcccttccttatgtgtgtctgctcatcgcaatgctgttcttcatctat
gccatcattgggatgcaggtgtttggaaacatcaaactgaacgacgaaaaccacataaac
cagcacaacaacttcaagaccttctccggtgcgctgatgcttctcttcaggagtgcgacc
ggggagtcatggcaggagatcatgctatcgtgtctgggggggcaggagtgtgagccagac
tcctccatggcccccatgaccatgtcccctgaccacgagggaggctgtggtactgacttc
gcctactgctactttgtctccttcatcttcttcagctccttcctgatgctgaatctgttt
gtggctgtgatcatggataactttgagtacctgaccagagactcttccatcctggggcct
catcacctggatgagtttgtccgtgtctggggagagtacgaccgcgcagcatgtgggcgt
atacactacactgccatgtatgagatgttgacccatatgtctccaccccttggtctgggg
aagaaatgccccagaggtatggcctacaagaggctggtgttgatgaacatgccagtggat
gaggacatgtcagtccacttcacctccaccttgatgtctctcatccgcaccgctctggag
atcaagatcgcacgaggtcagggaatgagtggggaggaccgagtagctctggacactgag
ctacagaaggagatcagtgtgatatggccgtacctccctcagaagaccctggatgtactg
gtgcccatcaacaaagattccgacatgacagtaggtaagatatatgcctccatgatgatc
atggactacttcaaacagaacaaagccaagaagctgagagcacagctggaagcacagaag
gccagcctgatgccgttcaagaggctggatgcctcgactctctctgaagacattctgtac
aatgcccatcccctgccctgcatgtccctcagtgccggctccgccctgaccagaggaggc
ctggtggcgttgagtcctctctcccaggacctgttcgccatgacctctgaccaggacacc
agcagtcaacactccaggacggagatggccagtggctccattaagcggtcctcgtccact
gtggctgaccagagggtgaatggcctgtggcaggaggagaagaagagtcctgatagactg
tacagaccacgccacaagagctacaaggctgccgtctcccggtcagaaagaaagaggcag
ttggacacagagaaggagcgcgggaggtccaaagagcgccgccacctcctctccccagac
acatcccgctgtaactctgaggagaggagtctacagccctcatgctcccctagcctagag
cgcacacacaccctggacaaacagggtaacagctccgacagccccatccccacctctgaa
tctagtacccctagtcgccgccccctgtcccagaccccaactcgctcccatccccacatc
tcctactcccctctggtgtgtcgcactcaccctccctccggggacgatgatgacgacagg
ggcagcccagagacccagaggtggggggaggcctccagagaggcaggtggagaggaacag
accgggccaaggggtcgtcgccaccaccaccagcagggctcccctctgcgtcgctacccg
tcggagccctatctcaccctgcaggaggacgagcacagtccggacccctccaggttcatg
gagacactgaccttcgaggcggcggtggccactagcctgggacgcgctaacacggtcagc
tccagctccagctccagctctagcttcagctcggcccgacggggctccaggagcggctgg
cagatccccaatggacacttccggaaacgcctggctcagaccgtctctgttgcaggctgt
gagccactcagcgacacagaggaggacggccgctgctag
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