Oncorhynchus kisutch (coho salmon): 109871534
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Entry
109871534 CDS
T09179
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X2
KO
K08533
RAR-related orphan receptor beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109871534
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109871534
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109871534
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109871534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
109871534
NCBI-ProteinID:
XP_020318014
Ensembl:
ENSOKIG00005004003
LinkDB
All DBs
Position
LG3:complement(19115029..19146023)
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AA seq
471 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQQQTCEAEALAR
VYSSSLTNGLSTLNHEIGGTYANGHVIELPKGQVNGGATGGYYHGMDSTQPSPDQSGLDL
AGIKHIKQEPVYDLTPVANLFNYSTYQDSQLAHSNVSMGELDRIAQNIIKSHLETCQYTA
DELQQLAWQTHSYDDIKMYQSKTRDVLWQQCAIQITHSIQYVVEFAKRISGFMELCQNDQ
ILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCS
LQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLIG
RIPMLSAVCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITMPK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagttataccgtgcaaaatctgtggagacaaatcatcaggaatc
cactatggagtcatcacgtgtgagggctgcaaagggttcttcagacgaagtcagcagaac
aacgctgcatactcatgccctcgccagaggaactgtctgatcgacaggaccaaccgaaac
cgctgccagcactgccgtttacagaagtgtcttgcactcggaatgtccagagatgcggtg
aagtttggccgcatgtccaagaagcagcgtgacagcctgtacgccgaggtacagaagcac
cagcagcggatcctgaatgagcggcagcagcagacgtgtgaggcagaggccctggcgcgt
gtctactcctccagcctgaccaacggcctcagcaccctcaaccacgagatcggaggcact
tacgccaacggccacgtcatcgagctccccaagggccaggtgaacggtggtgccacgggt
ggctactaccatggtatggactccacccagccctccccggaccagtcaggcctggacttg
gcgggcattaagcacatcaagcaggagccggtgtacgacctgacccctgtggctaacctg
ttcaactatagcacctaccaggacagtcagctggcgcacagcaatgtcagcatgggagag
ctagatcgtatcgcccagaacattataaagtctcacctggagacctgtcaatacacagca
gatgagctgcagcagctggcctggcaaacacactcctacgatgacatcaagatgtaccag
agcaaaacgcgagatgtgctgtggcagcagtgtgccatccagatcacccattccatccag
tatgtggtggagtttgccaagcgcatctcaggcttcatggagctttgccagaacgaccag
atcctcctgctcaagtcaggttgtctggaggtggtcctggttagaatgtgtcgggcgttt
aacccactcaacaacacagtactgtttgaggggaagtacgggggcatgcagatgttcaaa
gcactaggttgtgacgacttggtcagcgctgtgtttgactttgccaagagtctgtgctct
ctgcagctcactgaggaggagatcgctctgttctctgcagcagtgctcatctccacagac
cgtccatggctgatggaacccaggaaggtgcaaaagctccaggagaagatctactttgcg
ctgcagcacatcatgcagaagaaccacatggacgaggacgcgctggctaagctgattggt
cggatacccatgctgtcggccgtgtgtactctccacaccgaggagctgcaggccttccag
cagcttcaccctgagacggtgaatgtgctcttccccccgctctacaaggagctgttcaat
cccgaccccaatgcagcgatcaccatgcccaagtga
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integrated database retrieval system
