Oncorhynchus kisutch (coho salmon): 109871541
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Entry
109871541 CDS
T09179
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109871541
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109871541
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
109871541
NCBI-ProteinID:
XP_031662770
Ensembl:
ENSOKIG00005025398
LinkDB
All DBs
Position
LG27:20716282..20727883
Genome browser
AA seq
1105 aa
AA seq
DB search
MQDKTYQSVMYGDDATQISDKIFEWALQGDSAELEKHSSHLGVRDHANASPLHYASSHGH
ITTIKLIVQLTGPDELSASDEEGNTSLHWAVQRTQRESCACLLDLGANPNILNRRLMSPL
HMAVSLGHNTLIELLLSHSNTDANLEGDLGNTPVMLACCIDNHEALHLLFKYGARLCQQN
KLGHYPIHAAAFAGAKKSMQMVLQKGEEVGYSIESHINYVDKSFSTPLHLAVRGGNLEVI
KLCIEQGAKMDQQQCDKSTALHFACTQGATEAVKLMLSAHDRVCDVINLTDGTCQTPLHK
TTIFDHVELAEYLISKGGDINAIDCKGHTPLLLATSCSAWKTVSLLLTHGANLKIKDKHG
CNFLHLAILQPKGLTNLPPEFLKCSSVRELLDAEDNEGCTPMHYACRLGIPESVKNMLRL
NVSLDQKSKQKKSALHFAAEYGRINTCHRLLESMTNTRLLNEGDERGMTPLHLASRGGHV
IVVDLLLRKGALFHSDYKGWTCLHHAAAEGYSQTIIILLASNIKLLDKTDEDRNTALHLA
AREGHVAAVTLLLDRGAQITLNKSDASFLHEAVLNGRKDAAIAVIHNKRCAEAMLLFEVK
STKRCVVMDMIEFLPESFKHLLDTCVKESDDDINSTNYSIEYTFRWLQAPMHVIKLAKAD
KSFDFQPLTALNYMVKFNRIELLTHPVCKKYLEMKWNAYGMKVHLLNLAIYSLGLGPLTH
IIHTLKPVLNTNVTNTTSPSPSPSVSMVTTSLDEQCYIITTCMFLILAMSLYAVGKELVQ
IVQQGSKYFYEVTNALDWGAAISSLLFVIPLLMDLKDTWHWEAGVVAVLLSWINFLLYFQ
RFERVGIYVVMFLEIAKTLISIIVLFFFLLLAFALAFYALMLDHKLFENRASIPLVIMQT
FVMMAGELNYQENVLKPFLGGILPFPYLTYCIFVMFTFAVPILLINLMIGLAVGDIAEVQ
ANAELKQIGMQIELHTSLEEKMPYWLMKRVDQISLTEYPNRACDGKREMLFAMLGMAHER
TTLNLTSHPPTPMEQEISKQKYRLKEMSNIIEKQHNLLKLIVQKMEISSEAEEHDGPQLF
QGYRDKPLPCQSKWNPLLRALAARK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaagacctatcagtctgtgatgtacggagatgatgctacacagatttctgac
aaaatatttgagtgggctcttcaaggtgactcggcagagttggaaaagcactcatcccac
ctgggtgtccgtgaccatgccaatgccagccctctgcactatgcctcctcacacgggcac
attaccaccataaagctcattgtgcagttgactggtccagatgaactgagtgccagtgat
gaggagggcaacacgtcattacactgggctgtgcagaggacacagagagagagctgtgct
tgccttctggacctgggagccaacccgaacatcctcaaccgccgcctcatgtctccccta
cacatggctgtcagcctcggacacaacactctcatcgagctattgctgtctcacagcaac
acggatgccaacctggagggagacctggggaacacacctgtaatgttggcctgctgtatt
gataaccatgaagctctccatctactttttaaatatggtgccagactatgtcaacagaac
aagctggggcattatcccattcacgcagcagcctttgcaggggccaagaaatcaatgcag
atggttcttcagaaaggtgaggaagtaggttactcaattgaatcgcacatcaactatgtg
gacaaatcattcagtactcctcttcatctggccgtccgtggaggcaacctggaggtgatc
aaactctgcatagaacagggagctaaaatggaccaacaacagtgtgacaaatccacagcc
ctccactttgcctgcacccagggagcaaccgaggccgtcaaactcatgctatcagcacat
gatagagtctgtgatgtcatcaatctcacagatggcacttgccaaactccactgcataag
acaacaatatttgaccatgttgaattggctgaatacctcatttcaaagggcggagacatt
aatgccattgactgtaagggtcatactccactgcttttggcaacaagttgtagcgcatgg
aaaacagtgagccttcttcttacacatggtgctaatttgaaaataaaagacaaacatggc
tgcaatttccttcaccttgccatcttgcagcctaaaggtctgacaaaccttcctccagaa
ttcttaaagtgcagcagtgtgagagagctcctggatgcagaggacaatgagggttgtact
cccatgcactatgcctgcagactgggcattccagagtcagtgaagaacatgctcagactg
aacgtctcactggaccagaagtcaaagcagaagaaatctgcactgcatttcgcagccgag
tatgggaggataaacacctgccacagactcctggagagcatgaccaacaccagactgctg
aatgagggagatgagaggggtatgactcccctccacctggcgtcccgtggcggccatgtt
atagtggtggacctgctgctgcggaaaggagcgctgttccacagtgattataaaggttgg
acatgtctacatcacgctgcagcagagggatacagccagaccattatcatactcctggca
tcaaatatcaaactgctggacaaaacagatgaagacaggaacacagcgttacatctggct
gccagagagggccatgtggctgcagtgacactgctcctggacagaggggcccagataacg
ctcaacaagagtgatgcctccttcctccacgaagctgttctcaacggcaggaaagacgca
gccatcgctgtcatccacaataagagatgtgctgaggctatgctattgttcgaagtgaag
tcaactaagcgatgcgttgtcatggacatgatagagttcctgccagagtcattcaagcat
cttttggacacttgtgtaaaggagtcagatgatgacataaatagtaccaactactctatc
gagtacactttcagatggctacaagctcccatgcatgtcattaagcttgcaaaagcagac
aaaagctttgacttccagcctctcactgctctgaactacatggtgaaatttaaccgcata
gagcttttgacccatcctgtctgcaagaagtatctggaaatgaaatggaatgcctatggt
atgaaagtgcacctgctaaatctggccatctactcacttggtctggggcctctgacacac
atcattcatacactgaagcctgtcctcaacaccaatgtcaccaataccacgtcaccgtca
ccatcaccatcagtcagcatggtgaccacatcccttgacgagcaatgctacataatcacc
acatgcatgttcctgattcttgccatgagtctgtatgcagttggcaaggagcttgtgcag
atagttcagcagggttcaaagtacttctatgaagtgaccaatgcattggactggggtgct
gccatcagttctctgttgtttgtgatccctttactgatggacctgaaggacacatggcat
tgggaggctggggtagtggcagttcttctatcctggataaactttctgctctatttccaa
cggtttgaacgtgttgggatctacgtggtgatgtttttagagattgcaaaaactcttata
agcatcattgtactcttcttcttcctgctgctggcatttgccttggcgttctatgccctg
atgctagatcataaactttttgaaaatagagctagcataccgctagtaatcatgcaaaca
tttgtcatgatggctggagaactcaactaccaagaaaatgtcctgaagccatttctggga
gggattctgccgttcccatatttgacctactgcatttttgttatgttcacctttgctgtg
cccattctcctcattaacctaatgattggtttggctgttggtgacatagcagaggtacag
gcgaatgctgagctgaagcaaattggaatgcagattgagcttcacactagtctggaagag
aaaatgccatactggttaatgaagagggttgatcagatctcactcactgagtaccctaac
agagcctgtgacggaaagagagaaatgttatttgcaatgctgggtatggcgcatgagaga
accactctcaacctcacctctcatccacctacacctatggaacaggaaatcagtaaacag
aagtacaggttgaaggaaatgtctaatattattgagaagcagcacaaccttctgaagctg
atcgttcagaagatggagatcagttcagaggcagaagagcacgacggtcctcagctgttc
cagggctacagggacaagcccctcccctgtcagagcaaatggaaccctctgctgagggca
ctggcagccaggaagtaa
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