Oncorhynchus kisutch (coho salmon): 109871555
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Entry
109871555 CDS
T09179
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109871555
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109871555
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
109871555
NCBI-ProteinID:
XP_031662262
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All DBs
Position
LG27:complement(25387979..25402324)
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AA seq
699 aa
AA seq
DB search
MMTSWSGTKKNALVHLNELRPGLQYEIVSQTGPVHAPVFAVGVEVNGLRFEGRGPTKKKA
KMRAAELALRSFIQFPNAHQAHITMGNLNFINTTAPADFTSDQADLVPDTLFKEFQPEAQ
EDQILHHRTGGKELQFEEPPTQRHLYRAVKKGQALLSSICNHGRLVRLTLDLMSSANQKR
QRIGSSIVGELRPVALLNELMPGLRYVCLTERKKGRPIRSFVMAVRVDGRVFEGCGRSKR
LAKAEAAVSALQDLFNISLGPERSISNTASWAKSAQLPQCFAEYIFHLVREKHSELADCC
CTPSQSHRRHKVLAGIVMTRGFDLRRAQVVSLGTGTKCISGECVSDQGWAVNDCHAEVTT
RRAFLRFLYAQLELFLCNRPGSLEQSIFVRDKESLYRLRDGILFHMYVSSSPCGDARLNC
PYEITATHQSGYRFVRKLRCHLRMKMEGGEGTLPVSVLRANQKWDRRLPREAPVTMSCTD
KIARWNILGLQGSLLSHLVEPVYLHSLTVGSLCHTGHLGRTMARRMGHIAPLPSSYRRNR
LLLGCLSSSEGRQPGKSPSFSVNWSAGDGELEVVDVSTGRKDSGTPSRLCKRSFFTRWER
LHHQLSSPGGVLDAEEAHFLMSDSTTTLSARSVEGRVSPRSDATCRKKMEEAMKTYCGAK
MAAGAYQRARQKFVISLQQAGLGIWNRKPPEQEHFQSRV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttcctggtctggcacaaagaagaatgccctggtgcatttgaatgagctgaga
cccggtctacagtatgagatagtgtctcagacaggtccagttcacgcccctgtgttcgct
gtaggagtagaggtcaacggactcaggttcgagggccgaggccccaccaagaagaaggct
aagatgagggcagcagagctggctcttaggtccttcatccagttccccaacgcccatcag
gctcacatcaccatgggaaacctcaacttcatcaacaccacagcaccagcagacttcacc
tcagatcaggctgatctcgtccccgacacgctcttcaaggagtttcagccagaagcacag
gaagaccaaatccttcatcacagaacagggggaaaggagttgcagtttgaggaaccacca
acacaaagacacctctacagagcagtgaaaaaaggacaggcgttgctctccagtatctgt
aaccatgggagactagtgcgcctgacccttgacctgatgtcctcagccaatcagaagagg
cagaggatcggttcctctatcgttggggaactgaggcccgtggctctgctcaatgagtta
atgccaggcttgaggtacgtctgcctgacagagagaaagaaaggcaggccgatcaggagc
tttgtgatggcagtacgggtggatggaagggtatttgagggctgtgggcgcagtaagagg
ctggctaaagccgaggcagcagtctcagccctacaggacctgtttaacatcagtctgggt
cctgagaggagcatcagcaatactgccagctgggccaagagcgcacagctacctcagtgc
tttgcagagtatatcttccacttggtgagagagaaacacagtgagctggctgactgttgc
tgcactccctcccagtcgcacaggcgtcacaaagtactggcaggcatcgtaatgaccaga
ggctttgatctgaggcgagcccaggtggtgtctttggggacagggaccaagtgtatcagt
ggagagtgtgtcagtgaccagggatgggcggttaatgactgccatgctgaggtcaccacc
aggagggctttcctccgcttcctttatgcccaactggagcttttcctctgcaaccggcca
ggcagtttggagcagtcgatttttgtgcgagacaaagagtcattatacagactgagagac
ggtattctgttccatatgtatgtgagttcatcgccctgcggggacgcacgcctcaactgt
ccctacgagatcacagctacacaccagagcgggtatagatttgtgaggaagttgcgctgc
catctgaggatgaagatggaaggcggtgagggtacacttcctgtcagcgtactgagagcc
aatcagaaatgggacaggaggttgccgagggaagctcccgtaaccatgtcctgcacagat
aaaattgccaggtggaatattctaggtctccagggctctctcctatctcacctggtagag
ccggtgtacctccacagcctcacagtgggcagcctgtgccacacgggtcacctgggaagg
accatggcacgacgcatggggcacatcgcccctctgccctcgtcatatagacggaacagg
ctactgctcggctgcctcagcagcagtgagggtcggcagccagggaagtccccaagcttc
agtgtgaactggagtgctggagatggagagctggaggtggtggatgtctccacaggcagg
aaagactcagggacaccatccagactctgcaagagatccttcttcactcgctgggagaga
ctacaccaccagcttagcagtccaggaggagtattggatgcagaggaggcccattttctt
atgtcagatagcacaacgactctgtctgcacggtcggttgagggaagagtatcgcctagg
agtgatgccacctgtcggaagaaaatggaggaggccatgaagacgtactgtggagctaag
atggcagcaggggcctaccagagagccaggcagaagtttgtcatctcgctgcagcaggca
ggtctgggcatctggaacaggaaaccaccagaacaggagcatttccagagcagggtgtga
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