Oncorhynchus kisutch (coho salmon): 109871604
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Entry
109871604 CDS
T09179
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X7
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109871604
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109871604
Surveillance factors
Other surveillance factors
109871604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
DUF1477
Motif
Other DBs
NCBI-GeneID:
109871604
NCBI-ProteinID:
XP_020318105
Ensembl:
ENSOKIG00005050817
LinkDB
All DBs
Position
LG27:27885825..27916139
Genome browser
AA seq
1361 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGHGGGSSSIVATSPPLSPAMPKYKLADYRYGREEMLALYV
KDREIPVDLHDKDFLPILQEEPLPPLALVAFTEEEQRNFSMSVNSAAVLRLMGRGVGPVG
PGAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGGFGRGGREMHRSQSWEESHAESIFSPSR
GDRRFEKPGRKEPEVAPTHFLMNHIRANYEEVGTSVGGLPVRKHDFTRSESENWRTSRDE
VNGEDGEEGGWRLAGALACALRWDSDRWCPPSPDGPRSAGWREAHPGEQPRQRRLPFDAR
EDERGYRHPPSASGSLEEDGGGSLPEWCLEDAEEETGTFDSSGAFLSLKKAPKEPILEEA
ELDFRPLEECDEGLEEDGHPRETKDTDGEARREPIRKQDVGRAIEEAPPAPSLPEPLPPS
QPDRVEDPEGPLEKPLERPPAPEHRPEANKVPLHTPMSNTMLDSLSIPHTVAHTLTVSAP
SSTIQMQQKPLDVPVAMPAPLPFSASLRPQSTSIMAPNNMATSTGLMAPIGRPTAMPPHH
TMDEDEGLKHFEQEAEKMVAYLQDGDDRLAAKSSATKPAGLPLTHEAALKWFYKDPQGEI
QGPFSNPEMTEWFQAGYFTMTLLVKRGCDEVFQPLGEIIKMWGRVPFAPGPAPPPLLGDA
GDQERLKRQQELTALNLYQLQQLQYQYLLRQQYAQALAQQKAQALSSAPHQQQQQQQQQI
NLLLQQYQALKMRSSENTTSESLLPPVTRSMSVPESQGSVWEMQNTSQASCTSNIQQPTP
SAWEGSSVWDLPIDSMAQAPTIEQMQNLEKNKAAKLELERGEAELSAKMEEEEHQRQEEE
QLARQKQEEALKRQRKQQQEEAQRQQKEEEEERHAQEEALRRLEERRRREEEEERKQREE
FLRKQEEERRKQEELEALRRHEEEKRQEEEEAAAAVALVRQQQEEAKRREQEAARQQELA
RQRQQQQEALRRLQQQQQLAQMKLPSSSKWGQQSAVTAAAISQSQNALSLAEIQKVEEER
ERQAREEQRRQQAEHLKLLQQQALQDARNPQAKLSGWGSVAKQPATTKSLLEIQREEAQQ
VKQRKEQGAGGQQPSHPTVTQQNRAQNRATTALSPSVWGSVATSGGAPNWGGDSSIWGDS
TNSNMGFWEEEVAQAPPPARKPNAQKNNKGNANLSSRANKKVEEEEKLLKLFQGVNKRQQ
DGFMQWCEKTLHTLNTANNLDVPTFASFLKEVDSPYEVHDYVRAYLGDTSEAKEFAKQFL
ERRAKQNANQQKAPPAPQNQQPTLKQQQQDSMWGVSGTGSPSLYQSNHTSLQQQARFETV
TSGKKKKKQKMVRADPSLLGFSVNAASERLNMGEIETVEDF
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactcagacactcaacttcggaccagaatggctccgggccctgtctggcggt
ggccatgggggtggtagcagcagtatcgttgccacctcaccacctctctcacctgcaatg
ccaaagtataaacttgcagactaccgctatgggagagaagaaatgctagcactttatgtt
aaggatagggagatccctgtagacctgcacgataaggattttctgcccattttacaagag
gagcccctgccaccactggcacttgtagcatttacagaggaagagcagagaaatttttcc
atgtctgtaaacagtgcagctgtgctcaggctgatggggagaggagtgggtcctgttggg
ccaggggcgccgaggggtcgaagtacctcacggggtcgaggtcggggtagaggagacgga
gggttttaccaaagaagttttgatgacgtggaaggaggctttggacgtgggggcagggag
atgcaccgctcccagagctgggaggagagtcatgctgagtctattttctcaccatctagg
ggagaccgaaggtttgaaaagccaggtcgaaaagagccagaagttgctcctacccacttc
ctgatgaatcatatccgtgctaactacgaggaggttgggaccagtgtggggggcctgcca
gtgaggaagcatgacttcacgcgttcggagagtgagaactggcgcacgtcccgggatgaa
gtgaatggtgaggatggtgaagaggggggttggcgcctggctggcgccttggcatgtgcc
ttgcgatgggacagcgaccggtggtgccccccgagtccagacgggccgcggtcggcaggg
tggcgagaggcccacccaggggagcagccgcggcagcgcaggctccctttcgatgccagg
gaggacgagcgcggctacaggcatcccccatcggccagcggcagcctggaggaggatgga
gggggcagcctgccagagtggtgtctggaggacgctgaagaggagacgggcaccttcgac
tcctctggagccttcctttcgctcaagaaagctcccaaggagcccatcctggaggaggca
gagctggacttcagacccctggaggaatgtgacgagggtctggaggaggacggacacccc
cgcgagaccaaagacacagacggagaggccaggagagagcccatcagaaaacaggatgtg
gggagagcgatagaggaggcgccccctgctccctctcttcctgagcccctgccccccagc
cagcccgacagagtagaggaccctgaggggccgttggagaagccacttgagcgaccccct
gccccggaacacaggccagaggccaacaaagtccccctgcacacccccatgtccaacaca
atgctggactccctctccatcccccacaccgttgcacacactctcacagtgtcggccccg
tcgtccaccatccagatgcagcagaagcccctggacgttcccgtggccatgcccgccccg
ctgcccttcagtgctagcctcaggccccagagcacgtctatcatggctcctaacaatatg
gccaccagcacgggcctcatggcgcccatcggaaggcccacggccatgccaccacaccac
actatggatgaagatgagggactgaagcactttgaacaggaagcagagaagatggtggcg
tatctacaggacggtgatgaccggctggctgccaagagctcagctaccaaaccagccggc
ctgccactcacacacgaggctgctctgaagtggttttataaagacccccagggagagata
cagggtccattcagtaacccggagatgacagagtggttccaggcaggctacttcaccatg
accctgctggtgaagagaggctgtgacgaggtcttccagcccctgggtgagatcatcaag
atgtggggcagggtgcccttcgcccccggcccagcaccgccacccctactgggtgatgcc
ggggaccaggagcgtctgaagcggcagcaggagctgacggccctcaacctgtaccagctg
cagcagctgcagtaccagtaccttttgaggcagcagtacgcccaagccctggcccagcag
aaagcccaggccctcagctcagcaccacaccagcagcagcagcaacaacagcagcagatc
aacctgctcctccagcaataccaggccctcaagatgaggtcatcagaaaacacaacatct
gagtctctcttacctcctgtgactcggtccatgtccgtaccagaatcccagggttctgtg
tgggaaatgcagaacacctctcaggcctcctgcacatcaaacatccagcaacccacaccc
agtgcgtgggagggcagcagtgtgtgggatctgcccatagactccatggcccaggccccc
accatagaacagatgcaaaacctagagaagaataaggctgccaagctggagctggagcgg
ggtgaggcagagctgagtgccaagatggaggaggaggaacaccaacgccaggaggaggag
cagctagcacgtcagaaacaggaggaggcattgaagaggcagcggaagcagcagcaggag
gaggcacagcgccaacagaaagaggaggaagaggaacggcatgcgcaggaggaggccctc
cgcagactggaggagaggaggaggagggaggaggaggaggagaggaagcaaagggaagag
ttcctccgcaaacaggaggaggagcgccgaaagcaggaggagctggaggccctgaggagg
catgaggaagagaagcggcaagaggaggaggaggcagcggctgcggtggctttggtacgg
caacagcaggaggaggcgaaaaggagggagcaggaggcggcgaggcagcaggagctagcc
agacagaggcagcagcagcaggaggcgctccgccgactacagcagcaacagcagctcgcc
cagatgaagctgccgtcttcttctaagtggggccagcagtcagcagtcacggcagcagcc
atctctcagtcccagaatgctctgtcgctcgctgagatccagaaagtggaagaggagaga
gaacgacaggcacgagaggagcagcggcgccagcaggcggagcacctgaagctcctgcag
cagcaggccctgcaggatgcccggaatccccaggccaagctctctggctggggaagcgtg
gccaagcagccggccacgacgaagtccctgctggagatccagagagaggaggcccagcag
gtgaagcagaggaaggagcagggggctgggggccagcagcccagtcaccccacagtcacc
cagcagaaccgtgcccagaacagagctaccaccgctctgagcccctcagtgtggggctcg
gtggccaccagcggcggggctcctaactggggcggtgacagcagcatctggggcgacagc
accaactccaacatgggcttctgggaggaggaggtggcccaggccccaccccccgccagg
aagcccaacgctcagaagaacaacaagggcaacgccaacctcagcagtcgggccaataag
aaggtggaggaggaggagaagctgttgaagttgttccagggggttaataagagacagcag
gatggcttcatgcagtggtgtgagaagaccctgcacaccctcaacactgccaacaacctg
gacgtcccgacatttgcatccttcctgaaggaggtggacagtccgtacgaggtgcacgac
tacgtgcgcgcctacctgggggacacgtccgaggccaaggagtttgccaaacagttcctg
gagcgccgtgccaagcagaatgccaaccaacagaaagcgcccccggccccgcagaaccag
caaccaacactaaaacagcaacagcaggattcaatgtggggtgtaagcgggacaggctct
ccctctctgtaccagtcaaaccacaccagcctccagcagcaggcacgcttcgagaccgtc
acctcagggaagaagaagaaaaagcagaagatggtccgggcagaccccagcctgctaggt
ttttctgtgaacgcggcgtctgagaggttgaatatgggtgagatcgagacggtggaggac
ttttaa
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