Oncorhynchus kisutch (coho salmon): 109871665
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Entry
109871665 CDS
T09179
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109871665 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109871665 (ss18)
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109871665 (ss18)
GBAF(ncBAF) complex
109871665 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
109871665
NCBI-ProteinID:
XP_020318192
Ensembl:
ENSOKIG00005011033
LinkDB
All DBs
Position
LG27:18034781..18057930
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AA seq
416 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKCDSPTPPEVKLEPPTQNMPMGPGGMNPSGAPGPQPPHGHNMP
PEGMVSGGPTAPHMQNQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGAMNMPPSSHGSMG
GYNHAVPSSQGMPAQGQMNMTQGQGPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPG
GGGQHYQGQQNPMGMMGQVNPGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAG
QGASEERDPAANQQSPYEKDHGNAQYGQQQEAYQQGPPQQQGYPPQQQYPGQQGYPGQQQ
GYGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGPPQAQQQRPYPGYDQGQYGNYQQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacagacaacgtggaaagggtgatataacacccgctgga
attcaaaagttactggatgagaacaatcagctgattcaatgtataatggatttccagagc
aaaggaaagaccgcagaatgttcacagtaccaacaaatgctccacagaaatttggtttac
ctggccacgatagcagactccaatcagaacatgcagtctctgctccctgctaagtgtgac
tcccctactcctccagaggtaaagcttgaaccacccactcagaacatgcccatgggccct
ggtgggatgaacccgagtggagcgcctggcccccagcccccccacggacacaacatgccc
ccggagggcatggtcagcggcggccccactgccccacacatgcagaaccagatgaacggg
cagatgcctgggcccaatcacatgcccatgcagggccccgggcctggccccaaccagcct
cccaacatgcccggaagtggcgccatgaacatgccccccagcagccacggttccatgggc
ggctacaaccacgctgtgccctcgtctcagggcatgccagcccagggccagatgaacatg
acccagggacagggacccatgggcaactacggcccccggcccaacatgaacatgcagcct
aaccaaggccccatgatgcatcagcagcctccctcccagcagtacaacatgccccctggg
ggtggcgggcagcactaccagggccagcagaatcccatgggcatgatgggtcaggtcaac
ccgggcaaccatgtcatggggcagaggcctatgcccccttacagacccccacagcaagga
ccccctcagcagtacccagggcaggaagactactatggggaccagtacagtcacgcagga
cagggagcttcagaagagcgagacccagcagccaaccaacagtccccctatgaaaaagat
catggaaacgcccagtatggccagcagcaggaggcctaccagcaaggtcctcctcaacag
cagggctaccccccacagcagcagtaccccggacagcagggctatcctggacagcaacag
ggttatggtccatcccagggagctccaggccagtaccctcagggttacccccagggccag
gggcagcagtacggggcctaccggggcccccagcccggcccccctcaggcccagcaacaa
cgcccatacccaggctacgaccagggtcaatatggaaattaccagcaatga
DBGET
integrated database retrieval system