KEGG   Oncorhynchus kisutch (coho salmon): 109871665
Entry
109871665         CDS       T09179                                 
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109871665 (ss18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109871665 (ss18)
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    109871665 (ss18)
   GBAF(ncBAF) complex
    109871665 (ss18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 109871665
NCBI-ProteinID: XP_020318192
Ensembl: ENSOKIG00005011033
LinkDB
Position
LG27:18034781..18057930
AA seq 416 aa
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKCDSPTPPEVKLEPPTQNMPMGPGGMNPSGAPGPQPPHGHNMP
PEGMVSGGPTAPHMQNQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGAMNMPPSSHGSMG
GYNHAVPSSQGMPAQGQMNMTQGQGPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPG
GGGQHYQGQQNPMGMMGQVNPGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAG
QGASEERDPAANQQSPYEKDHGNAQYGQQQEAYQQGPPQQQGYPPQQQYPGQQGYPGQQQ
GYGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGPPQAQQQRPYPGYDQGQYGNYQQ
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgtcggtggcgtttgcacctcacagacaacgtggaaagggtgatataacacccgctgga
attcaaaagttactggatgagaacaatcagctgattcaatgtataatggatttccagagc
aaaggaaagaccgcagaatgttcacagtaccaacaaatgctccacagaaatttggtttac
ctggccacgatagcagactccaatcagaacatgcagtctctgctccctgctaagtgtgac
tcccctactcctccagaggtaaagcttgaaccacccactcagaacatgcccatgggccct
ggtgggatgaacccgagtggagcgcctggcccccagcccccccacggacacaacatgccc
ccggagggcatggtcagcggcggccccactgccccacacatgcagaaccagatgaacggg
cagatgcctgggcccaatcacatgcccatgcagggccccgggcctggccccaaccagcct
cccaacatgcccggaagtggcgccatgaacatgccccccagcagccacggttccatgggc
ggctacaaccacgctgtgccctcgtctcagggcatgccagcccagggccagatgaacatg
acccagggacagggacccatgggcaactacggcccccggcccaacatgaacatgcagcct
aaccaaggccccatgatgcatcagcagcctccctcccagcagtacaacatgccccctggg
ggtggcgggcagcactaccagggccagcagaatcccatgggcatgatgggtcaggtcaac
ccgggcaaccatgtcatggggcagaggcctatgcccccttacagacccccacagcaagga
ccccctcagcagtacccagggcaggaagactactatggggaccagtacagtcacgcagga
cagggagcttcagaagagcgagacccagcagccaaccaacagtccccctatgaaaaagat
catggaaacgcccagtatggccagcagcaggaggcctaccagcaaggtcctcctcaacag
cagggctaccccccacagcagcagtaccccggacagcagggctatcctggacagcaacag
ggttatggtccatcccagggagctccaggccagtaccctcagggttacccccagggccag
gggcagcagtacggggcctaccggggcccccagcccggcccccctcaggcccagcaacaa
cgcccatacccaggctacgaccagggtcaatatggaaattaccagcaatga

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