Oncorhynchus kisutch (coho salmon): 109871720
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Entry
109871720 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109871720
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109871720
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109871720
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
Endonuclease_7
zf-RING_UBOX
DUF4428
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109871720
NCBI-ProteinID:
XP_031662937
Ensembl:
ENSOKIG00005025948
UniProt:
A0A8C7HPB6
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All DBs
Position
LG27:22195629..22386157
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AA seq
646 aa
AA seq
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MDLHRAAFKMESSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSMGEKDMH
LPFNNGSYTFASMYHRQGAVPGGFPNRDFPSSLLHLHHQFAPPNLDCSPISMLNHSGVGA
FRPFASPPDDRDGAGGYQSAFTPAKRLKGCLDADASPHLRYTDAEGKEYDFGGGQIPSSS
PSALKAVEDAGKKIFAVSGLLSDRETSSSPEDRIERCKKKVSLYDSQTPICPICQVLLRP
GELQDHMEQEMERLTHMHLSKNPSHGHKDGSVVPGTPKSMLLSVHIKREGESPVVSPLSS
EDAHHSDRYQTFLRVRANRQTRLNVDDLCWCRRYAKESVKNAPFGLHNGAPLAPCCIGHA
RIGKMKRRKPEDGQVCPLCSAPLAGTEEEMSRHVEQCLFKREGVFAEDDSADMDGENGTR
FEEYEWCGQKRVRATTLLEGGFRGTGFAMCSTKESHDSDADLDVDGDDTLEYGKAQYTEA
DIIPCSGEDQGEAKEREALRGAVLNGGMPSNRIAAEFSKWASDEMPSTSNGESSKQQLPQ
DPNAACSSSNAPRTCKNSEIEKITEGSKATTFEALKARIRELEKQILRGDRYKCLICMDS
YTMPLTSIQCWHVHCEECWLRTLGNKKLCPQCNTITSPGDLRRVYL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcaccgggccgctttcaagatggagtcatcctcttaccttcccaaccctctg
gcatccccggccctgatggtgctggcttccaccgccgaggccagccgcgacgcctccatc
ccctgccagcagccccgccccttcggtgtgcctgtctccatgggggagaaggacatgcac
ctgcccttcaacaacggctcctacaccttcgcctccatgtaccaccgtcagggagccgtt
cccgggggcttccccaaccgggacttcccctcctccctgctgcacctgcatcaccagttc
gcccccccaaacctggactgctcccccatcagcatgctgaaccacagcggggtgggggcc
ttccgacccttcgcctcccctccagacgaccgtgacggggcagggggctaccagtctgcc
ttcaccccagccaagcgcctcaaaggctgcctggatgcagacgcctctccccacctgcgc
tacacggacgctgagggtaaagagtatgactttggggggggacagatcccctccagctcc
ccaagcgcccttaaggcagtggaggatgctgggaaaaagatttttgcagtgtccggcctg
ttgtccgaccgcgagacgtcatcgagcccagaggaccgcatcgaacgctgtaagaagaag
gtgtctctgtatgacagccagacgcccatctgtcctatctgccaggtgttgctgcgtcca
ggagaactgcaggaccacatggagcaggagatggagcgcctcacccacatgcacctcagt
aagaacccatcacacggacacaaggatggcagtgtggttccgggaactcctaagtctatg
ctgttgtcggtgcacatcaaacgcgagggagagtcaccggtggtctcccctctctcttct
gaagatgcccaccactccgacagataccagacgtttttaagagtgcgagcaaacaggcaa
acgcggttgaatgtcgatgacctctgctggtgcaggcgctacgccaaggaaagtgtcaaa
aatgctccctttggactgcacaatggagccccccttgccccctgctgcattggccacgcc
cggattgggaagatgaagcgccggaagccagaggatgggcaggtatgtccactgtgcagc
gcgccgctggcagggaccgaggaggagatgagtaggcatgtggaacaatgtctgttcaag
agggagggtgtgtttgctgaggatgactctgcagacatggacggagagaacgggacacgc
ttcgaggagtacgagtggtgcggccagaagagggtcagagctaccaccctgctggaagga
ggcttcagaggaacaggctttgccatgtgtagcacgaaggagagccacgacagcgacgcc
gacctggacgtggatggagacgacacgctggagtacggcaaggcccagtacacagaggca
gacatcattccctgctccggagaggaccaaggagaagccaaagaacgggaggccctgcgc
ggggcggtgttgaatggtggaatgccgtccaacagaatagcggcagagttctccaaatgg
gccagtgatgagatgccctccaccagcaatggcgagagcagcaagcaacagctgcctcag
gaccccaacgccgcctgctcatcctccaatgcgccccggacctgtaaaaacagtgaaata
gagaagatcacagagggctcgaaagccaccacatttgaagcactaaaggctcgtatccgg
gaactggagaaacagatccttcgaggggacagatataagtgtctcatctgcatggactcg
tacacgatgcccctcacctccatccagtgctggcacgtccactgtgaggaatgctggctc
aggactctgggaaataagaaactgtgcccacaatgcaacaccatcacatcgccaggagat
ctaaggcgcgtctacttgtga
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