Oncorhynchus kisutch (coho salmon): 109871724
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Entry
109871724 CDS
T09179
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109871724
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109871724
Transporters [BR:
oki02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109871724
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109871724
NCBI-ProteinID:
XP_020318279
Ensembl:
ENSOKIG00005026084
UniProt:
A0A8C7HRJ8
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Position
LG27:22496656..22580689
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AA seq
650 aa
AA seq
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MSESNSNAACTADQNGAVPGEPVKTDKNSRRGNWGNQIEFILTSVGYAVGLGNVWRFPYL
CYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFASQGCLGVWRISPMFKGVGYGMMVVS
TYIGIYYNVVICIAFYYFFSSMTNLLPWTYCNNPWNTPTCNGVVTPTGINNTLANVTRSL
VTGAAEVAVEVVNKTKRTSPSEEYWKHYVLKISDDIGNFGEVRLPILGCLAVSWVVVFLC
LIRGVKSSGKVVYFTATFPYVVLTILFIRGITLEGAVTGIKYYLTPQWHKILDAKVWGDA
ASQIFYSLGCAWGGLITMASYNKFHNNCYRDSIIISITNCATSVYAGFVIFSILGFMAHH
LNVDVSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAI
VDEIGTDWIIRNKTVVTGGVAIVGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMC
ICIMYVYGHKKYFKDVEMMLGFPPPIFFRVCWRFVSPIIISFILIFTVIQYKPITYNDYV
YPGWSLAIGFLMAMSSVTCIPIYALYKISKSEGTTFLERLKNSCKADIKWGPALSEHRIG
HYAAPVSEGEVEVRPLKEELKEKEDEKRDEISLTIQGSNGSTAHNTTPSA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccaacagcaatgcagcctgtacagctgaccagaatggagctgttccaggg
gaacccgtgaagacagataagaactccaggagagggaactgggggaaccagatagagttt
atcctcaccagcgtgggctatgctgtgggcttgggaaacgtatggaggttcccctacctc
tgctacagaaatggaggaggagccttcatgttcccctacttcataatgctggtgttctgt
gggatccctctgttcttcctggagctctccttcggacagtttgccagccagggatgcctg
ggggtctggaggatcagtcccatgttcaaaggtgtgggctacgggatgatggtggtgtcc
acctacatcggtatctactacaacgtggtgatctgcatcgccttctactatttcttctcc
tccatgaccaacctgctgccgtggacctactgcaacaacccctggaacacgcccacctgc
aacggcgtggtgacgcccacgggcatcaacaacaccctggccaatgtcacccgcagcctg
gtcaccggggccgctgaggtcgccgtggaggtggtcaataagacgaagaggaccagcccc
agcgaggagtactggaaacactatgtgctgaagatctcagacgacatcgggaatttcggg
gaagtccgtctccctattctgggatgtctggctgtgtcctgggtggtggtcttcctctgt
ctcatcagaggagtcaagtcttcaggaaaggtggtgtacttcacagcgacgttcccctac
gtggtgctgaccatcctgttcatcagaggcatcaccctggagggagctgtcaccggcatc
aagtactacctaaccccacagtggcataagatccttgacgctaaggtatggggagacgct
gcctctcagatcttctactctctgggctgtgcatggggagggctcatcactatggcctcc
tacaacaagttccacaacaactgctacagggacagcatcatcatcagcatcaccaactgt
gcaaccagcgtgtatgcaggcttcgtcatcttctccatcctgggcttcatggcccaccac
ctgaacgtggatgtatctgaggtggccgaccacggccccggcctggccttcgtggcctac
ccagaggccctcactctgctgcccatctcccccctctggtccctgctcttcttcttcatg
ctcatcctgctgggcctggggacgcagttctgcctgctggagaccctggtaacggccatc
gtggatgagatcggtactgactggatcattaggaacaaaacggtggtcacaggaggagtg
gctatagtgggcttcctgttgggggtgccgctcaccacacaggctgggatctactggcta
ctgctcatggataactacgctgctagtttctctctggttatcatctcctgcatcatgtgc
atctgcatcatgtacgtctatggacacaagaaatacttcaaggacgttgagatgatgctg
ggtttcccccctcccatcttcttccgcgtctgctggagatttgtgtcgcccatcatcata
tctttcatcctgatcttcacagtgatccagtacaagcccatcacctacaatgactacgtg
taccccggctggtccctagccatcggcttccttatggccatgtcctccgtcacatgtata
cccatctatgctctctacaagatctccaagtctgagggaacaacatttttggagcggttg
aagaattcatgcaaggcggacataaagtggggcccggccctgagtgagcaccggataggc
cactacgccgccccagtctcagagggagaggtggaggtacgtcccctgaaagaggagctg
aaggagaaggaggatgagaagagggatgagatcagcctcaccatccagggcagcaacggc
tccacagcacacaacactacccccagcgcatag
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