KEGG   Oncorhynchus kisutch (coho salmon): 109871739
Entry
109871739         CDS       T09179                                 
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109871739
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109871739
Membrane trafficking [BR:oki04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    109871739
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   109871739
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 HEAT_GCN1
Other DBs
NCBI-GeneID: 109871739
NCBI-ProteinID: XP_020318313
Ensembl: ENSOKIG00005050504
UniProt: A0A8C7LES1
LinkDB
Position
LG27:complement(30551678..30566026)
AA seq 943 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTSGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRVEIQPKHIFWSDSGELVCIA
TEDSFFILRYLSEKVAASQENNEGVTEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDSEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNAAMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDHCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLKESFVAEQFLRETCLGNSLPATNYPLITPNEERNILEEA
TGYEPKGSPLSLATPLLAEDSGEETMLAAGVMASVLAAVVAPVAAAVIPSEAEPEVAPEE
ESPSSSESQKDKVLDELEDDLDNMELDDIDTSDVNLDEDFLDD
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgcctctccggctggacatcaagcggaagctgacagcccggtcagaccgtgtgaagagc
gtggacctccacccgaccgagccgtggatgctggccagcctgtacaatggtagtgtctgt
gtctggaaccacgaaacacagaccttggtgaagaccttcgaagtgtgtgaccttccagtg
agagcatcgaagtttgtagccaggaagaactgggtcataaccggagcggatgacatgcag
atccgtgtgttcaactacaacaccctggagagggtccacatgtttgaggcccactctgac
tacatccgctgtatcgccgtgcatcccacccagccctacatcctcacaagcagtgacgac
atgctaatcaagctgtgggactgggagaagaagtggtcttgcagtcaggtgtttgagggc
cacacccactacgtcatgcagatcgtcatcaatcctaaagacaacaaccagtttgccagc
gcttctctggacagaaccatcaaggtgtggcagctgggctcctcctctcctaacttcacc
cttgagggccatgagaaaggagtcaactgcattgactactacagcggaggggacaagcca
tacctcatatcaggtgctgatgaccgtctggtcaagatttgggactaccagaacaagacg
tgtgtgcagaccctggagggccacgcccagaatgtgtcgtgcgtcagctttcacccagag
ctgcctatcatcatcacaggctcagaggacggcactgtgcgtatctggcactcgagtacg
taccgtctggagagcacgctgaactatggcatggagcgcgtgtggtgtgtgtgtggcctg
agaggctccaacaacgtggcgctgggctacgacgaaggcagcatcatcatcaagctgggg
cgtgaggagccagccatgtccatggacaccagtgggaagatcatctgggccaagcactcg
gaggtgcagcaggcaaacctgaaggccatgggcgacacggagatcaaggatggagagagg
ctgccgctggccgtcaaagacatgggcagctgtgagatctacccccagaccatccagcac
aaccccaacggaaggtttgttgtggtgtgtggagacggagagtacatcatctacactgct
atggccctgaggaacaagagcttcggctcagcgcaggagtttgtatgggcacacgactcc
tccgagtatgccatcagggaaagcaacagtgtggtcaaaatcttcaagaacttcaaggag
aagaagtctttcaagccagactttggtgctgaaggtatctatggaggctttttgctaggc
gtcaggtcagtgaacggtctggccttctatgactgggaaaacacagagctgatccgccgc
gtcgagatccagcccaaacatatcttctggtcagactcaggggagttggtgtgtatagcc
acagaggattccttcttcatcctgcgctacctgtcagagaaagtagccgcctcccaagag
aacaacgagggagtgaccgaagatggcatcgaagacgcctttgaggtccagggggagatc
caggaggtggtgaagacaggcctatgggtgggagactgcttcatctacaccagctctgtc
aacagactcaactactttgtggggggagagattgtcaccatcgctcacctggacagaact
atgtacctcctgggctacatccccaaggacgaccgcctgtacctgggtgacaaggagctg
aacatcgtcagctactccctactggtgtctgtgctggagtaccagacagctgtgatgcgc
cgggactttggcatggccgacaaagtgctgcccaccattcccaaggagcagaggacccgc
gtagcacacttcctggagaaacagggcttcaagcagcaggctctggccgtgtcatcagac
tcggagcacaggtttgagcttgccctgcagctgggggagctgaagatcgcctatcagctg
gctgtggaggcagagtcggagcagaagtggaagcagctggcagagctggccatcagtaag
tgccagtttagcctggcccaggagtgccttcatcacgcccaggactacggcggtctgctg
ctgctggccaccgcctcgggcaacgccgccatggtgggcaagctggccgagggagccgag
cgggacggcaagaacaacgtggcattcatgacctacttcctgcaggggaaactggaccac
tgtctagagctgctgatccggaccaaccggctgcccgaggcggccttcctggcccggacc
tacctacccagccaggtgtccagagtggtcaagctgtggagggagagcctggccaaggtc
aaccagaaggcggctgagtcactggccgaccccactgagtatgagaacctgttccccggg
ctgaaggagtcgttcgtggccgagcagttcctccgtgagacctgcctgggcaactccctg
cccgccaccaactaccctctcatcacgcccaatgaagaacgtaatatactagaggaggcc
acgggctacgagcccaaaggatccccactctccctcgctacaccgttactggctgaagac
agcggcgaggagaccatgctggccgcaggcgtgatggcgtccgtgttggcggcggtagtg
gcccccgtggctgcagccgtgatcccctcggaggcagagcctgaggttgcacctgaggag
gaaagccccagctcatctgagtcacagaaggacaaggtcctggacgaacttgaagacgac
ctggacaacatggagctggacgacattgatacctcggacgtcaacctggacgaggacttc
ctggatgactga

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