Oncorhynchus kisutch (coho salmon): 109871782
Help
Entry
109871782 CDS
T09179
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109871782 (ncstn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
109871782
NCBI-ProteinID:
XP_020318362
Ensembl:
ENSOKIG00005018137
LinkDB
All DBs
Position
LG27:11794363..11809474
Genome browser
AA seq
697 aa
AA seq
DB search
MGLESSKWAIIFLVCWLYKNVSCNSVEQKIYVELNNTVPCVRLLNATHQIGCQSSISGDT
GVIHVLESEEDLEWPLSKGPNPPYMVLLESSLFTRSIMMKMKNESNRVAGVAVVVPNTSP
PEFSPHTTCPNENTGVYSDNYGPNLAHCNTTVWNPRGNGLSYEEFDFPVFSLKEDNETEF
IKQCYLDHNRAVNGSAPQYPLCAMQLFSHMHAVTNTPTCMRRNDINFSINPEMVCDPLGD
YNVWGSIRPYNDTVFGHKENESVVIAAARLDSRAFFWEVSTGAEGSVSGFVTLLAAAQAL
REVTHEAPPTRNILFAFFQGETFDYIGSSRMVYDMENGKFVIDLDNIHSVLEIGQVALHS
GNNLFLHSDPVSRRNNTVNDVVKNLVNNLQSSTAGLGFLLVEPNVSQPLPPSSLQRFLRA
QPIPGIVLADHESAFNNRYYESFYDNAANLNLTYPSDLSPEEQLEFVTHTAESLTDVATV
VARALYKQAGGDESRVNTIKADPKIVTQMLYGFLVSSNNSWFQAVMAPELKNILKPSPPE
YYVGVAMSSTPTRLVQYLLANLTGAATNLTQSQCQKPDELPNESRQMYSYLWVQGIVPPN
STERDSFCVRASVRLTKAVSPAFELGEYASKDYSTWTESRWKFIKARIFLVASRDLEMLT
LGVGVAVLFTSLLVTYFISTKADVLFSSTREPASAAY
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggaatcgtcgaaatgggctataatattcttagtttgttggctttacaaaaat
gtgagctgtaactctgttgagcagaagatatatgtggagctgaataacactgtaccatgc
gttcgactgctcaatgctacacatcagattggctgccagtcctcgatatcaggtgataca
ggagtgatccatgtcttggagtctgaggaagatctggaatggcctttgagcaaaggaccc
aatcctccttatatggttctgttggaatcatccctcttcaccaggtccatcatgatgaag
atgaagaatgaatccaacagggtagctggggttgcagtggtggtcccaaatactagccca
ccagagttctcgccacacacgacatgtcccaatgagaacacaggtgtatactcggacaac
tatggtcctaatttggcacactgtaacactactgtatggaaccctcgggggaacggtcta
tcctatgaggaatttgacttccctgtcttctccttgaaagaagacaacgaaacagagttc
atcaaacagtgctacttggaccataatcgtgcagtgaacggcagtgccccgcagtaccct
ctgtgtgccatgcagctcttctcccacatgcacgcagtcaccaatactccaacctgcatg
agacgcaacgacatcaactttagcatcaacccagagatggtgtgtgaccctctgggtgat
tataatgtttggggttccatccggccctataacgacaccgtcttcggccacaaggagaac
gagagcgttgttatagcagcagccaggctggacagcagggcatttttctgggaggtttca
actggagcagagggaagtgtctcagggtttgtcactctgcttgctgctgcccaggcactg
cgtgaagtcactcacgaggcccctcccacacggaatatcctctttgccttcttccaaggg
gaaacctttgactacattggcagctctcggatggtttacgacatggagaacggcaagttt
gtgatagacttggacaatattcactcagtactagagattggtcaggtggccttgcatagt
ggcaacaacctctttctccactcagaccctgtgtccaggaggaacaacactgtcaatgac
gtggttaagaatcttgtgaacaatttacagtcctccacggctgggctcggcttcttattg
gttgagcctaatgtctctcagccactcccgccctcctccctccagcgtttcctgcgagct
cagccaatcccggggattgtgcttgcagaccacgaatccgctttcaacaacaggtactat
gagagtttttacgacaacgctgctaacctgaacctgacctatccatctgacttgagtcca
gaggaacagctggagtttgtgactcatactgcagagtcccttactgatgtggctacagtg
gttgcacgtgctctctacaagcaggccgggggagacgagtcccgagtcaacaccatcaaa
gcagatcccaaaatagttacacagatgctgtatgggtttctggttagttccaacaacagt
tggtttcaggcagtgatggccccagaactaaagaacattctcaagcccagcccaccagag
tactatgttggtgttgccatgtcttccactccaactcgtctggtccagtacctcctggcc
aatttaactggagcagccaccaacctcacccagagtcagtgccagaagccagatgagctg
ccaaacgagagcagacagatgtactcctatctctgggttcagggcattgtcccacccaac
agcaccgagagggattctttctgcgtacgtgcatcggtacgcctgaccaaagcagtgtcc
cctgccttcgagctcggagagtatgcttccaaagactattccacgtggacagaatcacgg
tggaagttcatcaaagctcgaattttcctagtagcgagccgggacttggagatgctgacc
ttaggcgtgggagtggctgtgttgttcacatccctactggtgacatacttcatcagcacc
aaggcagacgtcctcttcagctccacgagggaacccgctagcgccgcctattga
DBGET
integrated database retrieval system