Oncorhynchus kisutch (coho salmon): 109871809
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Entry
109871809 CDS
T09179
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109871809
03012 Translation factors [BR:
oki03012
]
109871809
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109871809
mRNA cycle factors
Stress granule specific factors
109871809
Translation factors [BR:
oki03012
]
Eukaryotic type
Initiation factors
eIF-4
109871809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
109871809
NCBI-ProteinID:
XP_031663193
LinkDB
All DBs
Position
LG27:complement(28189185..28241717)
Genome browser
AA seq
1785 aa
AA seq
DB search
MNKPPQPITGPTSVPLPSPSPGLTQLCFSASPLSQATYASGQPTSLVFATQTPQQMNSAP
QPRQFSTGPRALHQQGGYRALQPYYANRPTITTSVTRVQTSSGPRPVGPTHIYQPGSQMM
MIPGQQLSFAGSPQGYFIPPGQYRAPYMPPSPQYPVTSGTAGFYPGTSPAEYPTYEPSLA
VRERRGGGRENGRLSLHGAPLTSQRYPAGAYYPAQPQYSHTPPVQTAPVISPAQPQQQAL
PPQLPTHPPAPKRERVTIRIRDPNQGGRDITEEIMSGGRSTSTPPSQSSTTEEEGLAQTN
GEFTKPVTIVTRTDENAEPADCTVTAAETLPPVLSTPEPTTAAVPLEARQETDGQVAPLT
EQVVSESHAPVAGMRPEVPIPQREDQAPASSPLTASTSPPPAEVQTPPPATTMAQASHTV
GAGMTPAVKAVTPEGPSTQVELLAAPASVEKPLAQVAEEVVVVEEKVEKVKKEPAVTINP
EVVVAVVVIKEDTKPAPRLVAPIAVATGDDFVPSLKLVAAVEAATKTESVVLPPAPKQKA
MTEPISAPAPAAIPSVPEAEPAVAQKKVEQLPLSNGLPQEDPDEVAPVAAIERIATVITE
PAAPPPQETANPAAAAVEEEEKKEEEEEKRKEEEQKEEDASPVPLSSSPSEDSSMQAAVS
VPKKKRNMKELNKKEAIGDMLDAFKEEEAAAPATEPSSSPPEPSPVAPTSLPPTDAPDET
WEEKEDKQNADTPPLKPGDLKYQYKGEQWKPIDPEEKKRYDREFLLGCQFISASMNKPEG
LPLITDVVLDKANKTPMRPAEPGRNMNAGPDFTPAFMGNLGRQSSGGGGPRAPGRDHMGP
PGPRRSQQGQRKEPRKIITISSSLGGEVELNKAEKAWKPTVKKAVTRGRGAAPEDEESDD
PEQAKTQELFKRVRSILNKLTPQMFQQLMKQVTELTIDTEERLKGVIDLIFEKAISEPNF
SVAYANMCRCLMGLKVPTTDKPGVTVNFRKLLLNRCQKEFEKDQDDDVIFEAKQKEMEAA
KEEEKAGLKATLEEAKDQARRRSLGNIKFIGELFKLKMLTEAIMHDCIVKLLKNHDEESL
ECLCRLLSTIGKDLDFEKAKPRMDQYFAQMDKIIKEKKTSSRIRFMLQDVIDLRRSGWVP
RRGEQGPKTIDQIHKDAEQEEHMQQVKVQQQLMSRNDGGGRGGGGGGRDRGGRDQAGRGG
QQVGRGSQPQDEGWNTVPISTKNRPIDTSRLSKITKPGALDFSNQLLAPQLGGKGMWGSW
GKGSSGGTTGAKPATGAEPAETGRPATGNRFSALQQSAPPVSSSDADRRVPQRSSSSRDR
DRFDRFERHDSSRDERGGSRDARLPITKRSFSRETEERRGDSCTPTEPPVRRVASMTDDR
DRGGSGSRGGSGSRDRAPSKEVVVKRETAPTPPPDAPTKPAVTEEELEKKSSAIIEEYLH
LNDMKEALQCVVELNSAPLLFVFVRNGLENTLERSAIARERMGLLLHQLIKAGTLPTTEY
YKGLQEILEVAEDMAIDIPHIWQYLSELINPMLHEGGIPMGQLFREISKPLIPLRKAGVL
LVHILNLLCKEMTHKKVGGMWMEAGLNWRDFLPEDEDVNKFVTEQKIEFTLGEKSDGTNQ
KTTMSGEELSKQLDRLIQDKANNQRIRDWVQANLDEQQTSANQFVRSLMTSICQSAVICE
NPYKVDVEQITQRAKLLQRYLSDEKKELQALYALQALMVHMEQPANLLRMFFDTLYDEDV
IKEEAFYRWESSKDPAEQTGKGVALKSVTAFFTWLRDAEEESDKD
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaccaccgcagcctataacgggacccacctctgtcccactcccctccccctcc
cctggcctgacacagttgtgtttctctgcctcccctctttcccaggctacctatgcctct
ggacagcccacttctcttgtcttcgccacccaaacacctcaacaaatgaattctgcaccg
cagccacgacagttttccaccgggccccgtgctttacaccaacagggtggatacagggca
ctgcagccttactatgccaacaggcccaccataaccaccagtgtcacccgggtccagacc
agcagtgggcctcgtccggttggtcccacccacatctaccagcccggctcccagatgatg
atgatccctggtcagcagctgtcctttgctggctcccctcagggctacttcatcccccct
ggacagtatcgggctccctacatgccaccaagtccacagtaccctgtgacaagtgggaca
gcaggcttctacccaggcaccagcccggctgaataccccacctatgagccctctctggct
gtgagggagaggagagggggcgggcgagagaatgggcgtctctctctccacggtgctcct
ctcacctcccagcgctaccccgcaggtgcctactacccggcccagccccagtacagccac
acaccccctgtccagaccgcgcctgtcataagccctgcccagccccagcagcaggccttg
ccccctcagctgccgacccatccaccggcacccaagagggagcgcgtaacgatcagaata
cgagaccccaaccaagggggccgtgatatcacagaggagatcatgtccgggggaaggtcc
acctccacccccccttcacagtcctccaccacagaggaagaaggtcttgcccagaccaat
ggggaatttactaaacccgtcaccatcgtgacgagaacagatgaaaacgcagaacccgcg
gattgcacagtgacggccgccgaaaccctgcctccagtgttgtcaactccagagcctacc
actgcagctgtcccactggaggccagacaggaaaccgatggccaggttgccccgcttacc
gaacaggtcgtcagcgaatcacatgccccggtggcggggatgaggcccgaggtgcccatc
ccacaaagggaagaccaggcccctgcctcctcccccctgacagcttctacctcccctccc
cctgcagaggtacagactccaccccctgccaccaccatggctcaggccagccacacagtg
ggtgctggtatgacccccgcggtgaaggcagtgaccccggaaggtccttccacacaggta
gagcttctggctgcaccagcatctgtggagaagcctcttgcccaggtagcggaggaagta
gtagtggtggaggagaaggtagaaaaggtcaagaaggagccggcagttaccatcaatcca
gaggtagtagtggctgttgtggtcattaaagaagacactaaacccgctccacgacttgtg
gcccccatcgccgtggcaacgggcgacgatttcgttccgtccttgaagttggtggcggct
gtggaagcagccactaaaactgagagcgtggtgttgccgccagcgcctaaacagaaagcc
atgaccgagcccatttctgcccctgctcctgccgccattccctctgtcccggaggcggag
cctgctgtggcccaaaagaaggtggagcagctgcccctgtccaacggcctcccccaggag
gaccccgatgaggtagcccccgttgctgcaatagagcgcattgcaactgtaatcacagag
cctgccgctcccccacctcaggaaactgctaaccctgcagctgctgccgtggaggaggag
gagaagaaagaagaagaggaggagaagcggaaagaggaggagcagaaagaggaggatgca
tccccagtgcccttgtccagcagcccttcagaggactcgtctatgcaagctgctgtgtct
gtgccaaagaagaagaggaacatgaaggagctgaacaagaaggaagcaatcggagacatg
ctggatgccttcaaagaggaggaggcggcggcacctgccaccgagccgtcgtcttcaccg
ccggagcccagccctgtggccccgacctccttgccgcccaccgatgcgccagacgagacg
tgggaagagaaggaggacaagcagaacgccgacacacccccgctcaaaccgggcgacctc
aagtatcagtacaaaggagagcaatggaagcctatcgacccagaggagaagaagaggtac
gacagggagttcctgctgggttgccagttcattagtgccagcatgaacaagcctgagggc
ctgcctctcatcacagacgttgtgctagataaggcgaataagacccccatgcgcccagcg
gagccgggtcgcaacatgaacgccgggccagacttcacccccgccttcatgggtaacctg
ggtagacagtcctctgggggagggggaccacgggcccctggaagggaccacatgggaccc
cccggaccacggcgctcccagcagggccagcgcaaggagccccgcaagatcatcacaatc
tcctcatcgctaggtggcgaagtggagctcaacaaggcggagaaggcctggaagcccaca
gtgaagaaggctgtgacccggggccgaggagccgcccctgaggatgaggagagcgacgac
cccgagcaggcaaagacccaggagctgttcaagagggtccgctccatcctcaacaagctg
acccctcagatgttccagcaactgatgaaacaggtcacagagctgaccatcgacacggag
gagcggctgaagggagtgatcgacctgatctttgagaaggccatctccgagcccaacttc
tctgtggcctacgcaaacatgtgccgctgccttatggggttgaaagtgcccaccacagac
aagccgggagtgactgtaaacttccgcaagctgctgctcaaccgctgtcagaaagagttt
gagaaggaccaggatgatgacgtcatctttgaggccaaacagaaggagatggaggctgcc
aaagaggaggagaaagctggtctgaaggcgacgctggaggaggccaaagaccaggcgcgg
cggcggtcgctgggcaacatcaagttcatcggtgagctgttcaagctgaagatgctgacg
gaggccatcatgcacgactgcatcgtcaagctgctgaagaaccacgacgaggaatcgctg
gagtgcctctgtagactgctgtccaccatcggcaaggacctggactttgagaaagccaag
ccccgtatggaccagtactttgcccagatggacaagatcatcaaggagaagaagacctca
tctaggattcgcttcatgttgcaggacgtcatcgacctcagacggagtggctgggtgccc
cggcggggggagcagggtcctaagaccattgaccagatccacaaggatgctgagcaggag
gaacacatgcagcaggtcaaggttcagcagcagctcatgtcaaggaacgacggaggagga
cgaggaggtggtggagggggaagagacagaggaggaagggatcaggcgggccgcgggggc
cagcaggtgggaaggggcagccagccccaggacgagggctggaacacagtgcccatctcc
accaagaacagacccatcgataccagccggctcagcaagatcactaagcctggtgctctg
gacttcagcaaccagcttcttgctccccagcttgggggtaagggcatgtggggcagctgg
ggcaagggcagcagtggaggcaccacaggagccaagcctgccactggagctgaaccagcg
gagactggccgtccggccaccggcaaccgtttctctgccctgcagcagtcagctccacca
gtatcctcctcagacgctgaccgcagggtaccccagaggtccagctccagtcgtgaccgg
gacaggtttgaccgcttcgagcggcacgacagcagtcgtgacgagcgtggtggcagtcgc
gacgcccgcctccctatcactaagcgcagcttcagccgtgagacagaggagcgtaggggt
gatagttgcacccctacggaaccccccgtccggcgcgtagccagcatgactgacgacaga
gaccggggaggcagcggtagccggggaggcagcggtagccgggacagggctcccagcaag
gaggttgttgtgaagcgtgagacagcccccacccctccccccgatgctccgaccaaaccg
gccgtgaccgaggaggagctggagaagaagtccagcgccatcattgaggagtacctccat
ctcaatgacatgaaggaggcactgcagtgtgtagtggagctgaacagcgccccgctgctc
tttgtgtttgtgcggaacggtctggagaacactctggagcgcagcgccatcgccagagaa
cgcatgggcctgctgctgcaccagctcatcaaggctggcaccctgcccacaacagagtac
tacaaagggctccaagagatcctggaggtggctgaggacatggccatagacatcccccac
atctggcaatacctgtctgagctcatcaaccccatgctccacgagggaggcatccccatg
ggacagctcttcagagagatctccaagcccctgattcccctgcgtaaggccggtgtgctg
ctggtgcacatcctcaacttactctgtaaagaaatgacccataagaaggtgggcggtatg
tggatggaggcggggctcaactggagagacttcctgccagaggacgaggatgtcaacaag
tttgtgactgaacagaaaattgagtttaccctgggggagaagtcagacgggaccaatcag
aagacaaccatgagtggggaggagcttagcaaacagcttgacagactgatccaggacaag
gctaacaaccagcgcatcagagactgggtccaggccaacctggacgaacagcagacgtcc
gccaaccagtttgtgcgctctctgatgacatccatttgccagtcagccgttatatgtgag
aacccatacaaggtggacgtggagcagattacccagagggcaaagctgctgcagcggtac
ctgagtgacgagaagaaggaactgcaggccctctatgccctccaggccctcatggtgcac
atggagcaaccggccaatctgctgcggatgttctttgacacgctttacgacgaggacgtg
atcaaagaggaggccttttacaggtgggagtccagcaaagacccagccgagcagactgga
aagggtgtggccctcaagtcggtcaccgccttcttcacctggctccgtgatgccgaagaa
gagtccgacaaagactaa
DBGET
integrated database retrieval system
