Oncorhynchus kisutch (coho salmon): 109871811
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Entry
109871811 CDS
T09179
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7-like
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109871811
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109871811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
ResIII
Chromo
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
109871811
NCBI-ProteinID:
XP_031662263
Ensembl:
ENSOKIG00005044555
LinkDB
All DBs
Position
LG27:28557413..28651510
Genome browser
AA seq
3021 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPIGQQEHQGYGSLSSNSLHHPSQAG
RGQPKMGHPYDPFAGYEQQQGNGPAVNGMVTSRYHNSPQQPGGGHHVYPRAQGDGHGQSF
PDGGAVWGPQPGPGQGRPPFQQQQASPQAPSHQQHGPSGPQAPSHQQHGPSGPQAPSHQQ
HGPSGPQAPSHQQHDPSGPQDHGHRMGPYMGRSDYATMQGHPGQTQTPPRINHFPPGMGQ
EPNHYMGHVGLQQNSSMTGHPAQQQQPPQQFLHRPGQGPVHTQDHMASHTSHQQHQGLAG
RPHQNMGFNMHGQAASPGVVTSSGPYPPYPQYGNLNQGLAGSAGMSPGMSLGSTSNNNSS
ASGPMGPDQVQCYPNAGGGPQCYPDPQVHQQPVHPNQITGQPMHPSQAQATPHKQPRLPT
PPHGSYGSPTSMSPMKGMGTTAVTPPPQQVRPPSAGLAPEVGGYPGVSLQAPNPMAPPQR
NTTPLGVQQPQHHPQHLSHPQQHPHMPQSQQLYQGMSLNQRGPLDQVRPPGPMAHGEHPG
PQDQQLLTPQQQAPKSGLQPPPITFQQQVHPTQTALPPSQAQTHLAGPHHQSSPPNQPLW
AQAGHQSPPTPQKVPHIQYSTSSEMTASDRTPASGANLQPANRDKKPTEQKPKKKKAKVM
VEGEKKPKKKKGGCIEEYGEEGKRKVGDGPWAEVNCLTGALEESLVKTKKKPKEPKEPKT
PKEPKEKAKSTTPKVKMPKKPRSTKKVESAEGSGSSVKETKRMREPSVSSDEDDDGVQVH
THTHTPPLRPLCPNTHTNPNLSLPPQPVKLYLVKWCSLPYEDITWELKADIDQAKIDEYE
AVAARQPKTKRVERPPTENWHKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILAD
EMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASR
KTIQAYEMNYRDVQGRVIKGAYKFHAVITTFEMILTDCPELRSVSWRCVVIDEAHRLKNR
NCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEE
QVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGG
PGGGGGAWGGGGAQVPNLLNTMMELRKCCNHPYLINGAEEKILDDFRENHHAEMPQFHLQ
AMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGN
LRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI
GQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVPQLSKKEVEDL
LRKGAYGALMDEEDEGSKFCEEDIDQILLRRTQTITIESEGKGSTFAKASFVAAGNRTDI
SLEDPDFWQKWAKKAELDMEAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDG
ENEKPLTKLRRPQDRAHGYPRSECFRVEKNLLVYGWGRWGDILSRGRFKRPLQEQDVETI
CRALLAYCLLHYRGDENIKRFIWDLITPSEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAP
PAPPQLPRAEWLASCNPDLLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDHADRIL
EGTDSSEMDIWIPQPFHAEVPADWWDSEADKSLLIGVFKHGYEKYNSMRADPALCFLERV
GMPDAKAIAAEQRGADMMADGPEGEDEDPEYKPLRMTFKDEMEDFANSPLDDKDDTVEVE
SGESKPGENVAGSRGAGRLYWPAASALTARLRRLVTAYQRTHKREQLRQEAMARPDGRRR
RRPREHLFSMVTDGGAYVQEDGAFMAEGSPYMATGGAFIPEATVLPAEGGAAFKERRQRW
TRREESDFYRVVSTFGVIYDTDHQLFDWTQFRAFARLDKKSDESLEKYYFSFVAMCKRVC
RMQVKANTELPDPTLIIDPITEERASRTLYRIELLRRIREQVLPNPLLGERLRLCQPSSD
LPEWWACRRHDHDLLLGASKHGVSRTDYHILNDPALGFLEAHRKFTKGALAGVPQPPRDG
ALSTASSSSTEQATATAGAEKSLPVQEEEEGKEMKEEGDDIPYTKPEKPDEGKEEEMEAK
KEEKAGSPKKVKDEEEEKGEEEDGEEKVEVTGDADGETSKEAKPEKEYKAPTVETKDQDK
KLDFQEKPESPKASEEQGTKKEERDEKEGSPAKSPKPVAEKGPDEEKVEEDYRSEKSSQA
EAAATSEQKNFDEESDASLSTTARDETRDGFCPEEEPSAIPAFQERATSSLWPKDRVMIN
RMDNICDAVIKGKWPANRRQFFDSPGLLPGYPGPMTSESPMPRQSLAELSMAAAAQTNFS
GSEDLTLSPQVNEDALSISLPKQRRRRRRKVEIEADRAAKRRNLMDMVAQLRESHAAESQ
SQAMDLTKGILHQHHKSSAPSPASYPSSMVSPAAHKAQMELLQAATPSRHRANCSLAEAD
LPTRRRRGRRKNVEGLELLFMRGATEDSERTKASVEGLQMLPRSHRHNIPSTSARVPSVS
AMEDREAGTPSNKDLSDWLRQHPTYTMDMPTAYTPKSEETLLSSQFPKPKQKRHRCRNPN
KIDINTLTGEERVPVVNRRNGRKMGGAMAPPMKDLPRWLLENSDFAVAPDWTDIVKQSGF
LPEAMFDRLLTGPLVREEGVRRRGRRPKSEIAKATAAASAASSGGLNPLLINGLFGGMDL
TSLQGLQSLQSLQLQLMGFPGMGGADSKHASAMLPLMLPGMAGMGVLPNMFGLGGLFASN
LAAASPAAASNGTNNEDDSDETSKRDAREGEEEQDKEKDDTGEEEESSKAIGEAAALNVA
AAAMASSGMSANSLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTLPGFPPTALTDLQSAMA
GAMGVASGAQGQEKEPSQVALDCPAAAIADPETADDSDSAESLEKTAESSALEDETSALA
GEADSPEDLEEGEDALEEEEK
NT seq
9066 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccggggatgttgagcctgttcggggatgatgccaacctgttctcggatggg
ctggagggcctgggggactgtggcttcccccagggccagcccaaccccataggacagcag
gagcaccagggctacgggtcgctctcctccaactcactccaccacccctcgcaggccggc
cgcggacagcccaagatgggccacccctacgacccctttgcaggctacgagcagcagcag
ggcaacggtcccgccgtcaacggcatggtgacctctcgctaccacaacagcccccaacaa
cccggaggggggcaccatgtctaccccagagcccaaggcgatgggcacgggcagtccttc
cctgacggaggagccgtatggggcccccaacctggccccgggcagggcaggcctccattc
cagcagcaacaggcatccccccaggccccctcccaccagcagcatggcccctctgggccc
caggccccctcccaccagcagcacggcccctctgggccccaggccccctcccaccagcag
cacggcccctctgggccccaggccccctcccaccagcagcacgacccctcagggccccag
gaccacggccaccgtatgggcccctacatgggccggtccgactatgccactatgcagggc
caccctggccagacccagacgccgcccaggatcaaccacttccctccaggcatgggccag
gagcccaaccactacatgggccacgtggggctccagcagaactccagcatgacgggccac
ccggcacagcaacagcagcccccccagcagttcctccaccggcccggccagggccctgtt
cacacccaggaccacatggcctcccacacctctcaccagcagcaccagggcttggccggg
aggccacaccagaacatggggttcaacatgcacggccaggcagcctctcctggtgttgta
accagctcagggccgtaccccccctacccccagtacggcaaccttaatcagggattagcc
ggcagtgcagggatgagtcccggcatgagcctcggcagcaccagcaacaacaacagtagt
gccagcgggcctatggggccagaccaagtccagtgttaccccaacgcaggggggggccca
cagtgctacccggatcctcaggtacaccagcagcctgtccaccccaaccaaatcaccggc
cagcccatgcacccctcccaggcccaggccaccccccataagcagccccgcctccccaca
ccacctcatggatcttacggttctcccacctccatgtcccccatgaagggcatgggaacc
accgcggtcacacctccgcctcaacaggtccgaccccctagtgcaggtcttgctcccgag
gtaggggggtaccccggagtgtcactccaggcccctaaccccatggccccccctcagaga
aacaccactcccctgggcgtgcagcaaccgcaacatcatccccagcacctctcccaccca
cagcagcacccccacatgccccagagccagcagctctaccagggtatgtccctcaaccaa
agaggccctctcgaccaggtgagacctccaggtcctatggcccacggtgagcatccagga
ccccaggaccagcagctgctcactccccagcaacaggcacccaaatctgggctgcagcca
cctcccattaccttccagcagcaggtgcacccaacccagaccgctttgcccccatcgcag
gctcagacacatctggccggcccccaccaccagagctccccgcccaaccagccactttgg
gcgcaggcaggacaccagtcgcctccaaccccccagaaagtgcctcacattcagtattct
acgtcatctgagatgacagcttctgacaggacacccgcttcgggggctaacctccagcca
gccaaccgtgacaagaagcccaccgagcagaaaccaaaaaagaagaaagcgaaggtgatg
gtggagggggaaaagaagcccaaaaagaagaaaggaggatgtatagaggaatatggcgag
gaggggaaacgaaaggtcggggacggtccctgggcggaggttaactgtctgacaggtgcc
ctggaggaatcacttgtgaagacgaagaagaaaccgaaggagcctaaagagcccaagact
cccaaagagcccaaggagaaggccaagagcactacccccaaggtcaagatgcccaagaag
cccagaagcactaagaaggtggagtcagcggagggcagtggcagcagtgtgaaggagacg
aagaggatgagggagccctcggtcagctccgatgaggacgatgacggtgtccaggtacac
acacacacacacacacccccactacgccctctctgccccaacacacacactaaccccaac
ctctctctgcccccccagcctgtgaagctgtacctggtgaagtggtgttccctgccctat
gaggatataacttgggagctgaaggccgacatcgaccaggccaagatcgatgagtacgag
gccgtggcggcccgtcagcccaagaccaaacgcgtggagcgacctcccaccgaaaactgg
cataaatccgagagttccagggattataaaaacgacaacgcactcagggaataccagctg
gagggagtgaactggctgctcttcaactggtataatacacggaactgcatcctagcagat
gaaatgggcctgggcaagaccatccagtccatcacattcctctatgagatctacctgaag
gggatccacgggcccttcctggtcatcgcccccctctccaccattccaaactgggagagg
gagttccgcacctggaccgaactcaacgtgatcgtctaccacggcagccaggccagccgc
aagaccatccaggcctacgaaatgaactaccgcgacgtgcagggtcgtgtgataaaggga
gcgtacaaattccatgcggtcatcaccacatttgagatgattctgacagactgtccggag
ctgcgcagcgtctcgtggcgctgtgtggtcatcgacgaggctcaccgcctcaagaacagg
aactgcaaactgctggagggtcttaagatgatggacatggagcacaaggtgctgctgacc
gggacccccctgcagaacacggtggaggagctcttcagtctgctcaacttcctggagcct
gaacgcttcccctctgagaacaccttcatgcaggagtttggagacctcaagactgaggag
caggtccagaagctgcaggccatcctgaagcccatgatgctgcgacgtctcaaggaggac
gtggagaagaacctggcccccaaggaggagaccatcatcgaggtggagctgaccaacatc
cagaagaagtactaccgggccatcctggagaagaacttctccttcctgtctaaaggagga
ccgggaggaggaggtggtgcatggggaggcggcggtgcacaggtccccaacctgctcaac
accatgatggagctgaggaagtgctgcaaccacccctacctcatcaatggtgcagaggag
aagatcctggacgacttccgtgagaaccaccatgccgagatgccccaattccacctacag
gccatgatccaggcagcgggcaagctggtgctgatcgataagctgctgcccaagctgaag
gccgggggacacagggtcctcgtcttctcccagatggtgcgctgcctggacatcctggag
gactacctcatccagaaacggtacccgtatgagcgtatcgatggccgtgtgaggggtaac
ctccggcaggctgcaattgaccgcttctctcgtccggactctgaccgctttgtattcctg
ttgtgtacccgggccggaggtctgggcatcaacctgaccgctgccgacacctgcatcatc
tttgactctgattggaacccccagaatgatttacaggcgcaagccagatgccacaggatt
ggccagagcaaggcagtgaagatctacaggctgatcaccaggaactcctatgagagggag
atgtttgacaaggccagcctcaagctgggcctcgacaaggctgtgctgcagtccatgagt
ggccgagaaaatgcagccaacggggttccacagctgtctaagaaggaggtggaggacctc
ctccgtaaaggagcctacggagctctgatggacgaggaggacgagggctcaaagttctgc
gaagaggacattgaccagatcctcctgagacgaacccagaccatcaccattgagtccgag
ggcaaggggtccaccttcgccaaggcgagctttgtggctgctgggaacaggacggacatt
tccctggaggaccctgacttctggcagaagtgggccaagaaggcggagctcgacatggaa
gccatcaatggacggaacacccttgtgattgacactccgagggtgcggaagcagacacgc
cactacagctcaatgaaggaggacgaattggcagagttctccgagctggaaagtgacggc
gagaatgagaagcccttgaccaaactcaggcgaccccaggaccgagctcacgggtacccc
cgcagcgagtgcttcagggtggagaagaacctgctggtttatgggtggggtcgctgggga
gacatactgtcccgcgggcgtttcaaacggcccctgcaggaacaagatgtggagaccatc
tgccgcgccctgctggcctactgcctgctgcactaccgtggcgacgagaacatcaagcgc
ttcatctgggacctcatcacgccctctgaggacggacagagccgcacactcaccaaccac
tccggtctgtctactccagtaccgcggggtcgtaaggggaagaaggggaaaccagcccca
cctgcccctccccagctccccagggcagagtggctggccagctgtaaccctgacctgcta
ctgcaggaggacagctacaagagacacctcaaacaccactgtaacaaagttctccttagg
gtccgtatgctctactatctgcgacaggaagtcatcggtgaccacgccgacaggatccta
gagggaacagactcaagtgaaatggatatctggatccctcagcctttccacgccgaggtg
cccgccgattggtgggacagcgaggcagacaaatcgctgctcatcggtgtcttcaaacac
ggctatgagaagtataactcgatgcgtgccgaccctgcgctgtgtttcttggagcgggtg
ggcatgcccgacgccaaggccatcgctgcagagcagaggggggcggacatgatggcagat
ggtccggagggagaggatgaagaccccgagtacaagcctctccgcatgacctttaaagat
gagatggaggactttgcgaactcacccctggatgacaaagatgacactgtggaagttgag
agtggtgaatctaaaccaggtgagaatgtagcaggcagcagaggggcgggtcgtctgtac
tggccggcggcctcggccctcaccgctagactccgccgcctcgtcacggcctaccagcgc
acgcacaagagggagcagctccgccaggaagccatggcccggcccgacggacgccgccgc
cgccggccccgagaacatctcttctccatggtcacagacggcggggcctacgtgcaggag
gacggagccttcatggcagagggaagtccttatatggccacgggcggggcttttatacct
gaggcgacggtgctcccggcggaaggaggggccgccttcaaagagaggcgtcagaggtgg
accaggcgtgaggaatccgacttctaccgggttgtgtccacgtttggtgtgatctatgac
acggaccaccagctctttgactggacccagttcagggccttcgcccggctggacaagaag
agtgacgagagcctggagaaatactacttctcctttgtggccatgtgcaagcgggtgtgt
cgcatgcaggtcaaggccaacacagagctcccagaccctaccctgatcatcgaccccatc
acggaggagcgcgcctcacgcaccctctaccgcattgagctgctgcgtcgcattcgtgag
caggtgctgcccaaccccctgctaggtgagcgcctgcgcctctgccagcctagctccgac
ctgcccgagtggtgggcctgccgccggcacgaccacgacctcctcctgggcgcctccaag
cacggcgtgagccgcactgactaccacatcctcaacgaccctgcgctgggcttcctggag
gcccacaggaagttcaccaagggggcattggctggggtgcctcagccgccccgcgatgga
gctctctctactgcttcttcctcttctactgagcaggccacagctactgctggtgctgaa
aaatccttacctgtccaagaggaggaagaagggaaggagatgaaagaggaaggtgatgat
attccatatactaaacctgagaaaccagacgaaggcaaggaagaagagatggaggcgaag
aaggaagagaaggccgggtctcccaagaaggtgaaggacgaggaggaagagaagggagag
gaggaagacggagaggagaaagtggaggtcaccggcgacgctgacggagagacttccaag
gaggccaaacccgagaaggagtacaaagctcccactgtggagaccaaggaccaggacaaa
aagctggacttccaggagaaaccagagtctcctaaagcatcagaagagcagggaaccaag
aaggaagagagagatgagaaagaaggaagccctgccaagtctcctaaaccagtggctgag
aaagggcccgatgaggagaaggtggaggaagactacaggtctgagaagtcctctcaagct
gaagcagccgccacctcagagcagaagaactttgacgaggagagcgacgcctcactgagc
accacagccagagacgagacccgtgacgggttctgccccgaggaagagccgtctgccatc
ccggccttccaggagagagccacctcatccttatggcccaaggaccgtgtcatgatcaat
cgcatggacaacatctgcgatgcggtcatcaagggcaagtggcccgccaaccgacgccag
ttcttcgactccccgggcctgttgcctggataccccggccccatgacgtctgaaagcccc
atgccgaggcagagcctggccgaactgtcgatggcagcggccgctcagaccaacttcagt
ggcagcgaggacctcaccctctcgccccaggttaatgaggatgctctgagcatatcattg
ccgaagcagcgtcgtcgcaggcggaggaaggtggagatagaggcggaccgtgcggccaag
cgcaggaacctgatggatatggtggcccagctcagagagtctcacgctgcagagtcccag
agccaggccatggatcttaccaagggtattctgcaccagcaccacaagtcttcagcgccg
tccccggcgagctaccccagcagcatggtgtcacctgctgcccacaaagcacagatggag
cttctgcaggcggccacaccctccagacacagggccaactgctcattggccgaggctgac
ctgcccaccaggaggaggcggggccgcagaaaaaatgtggaggggctggagctgctgttc
atgagaggagccacggaggattcagagaggaccaaagcttcagtggaggggttgcagatg
ctcccacgttcccaccgccacaacattcccagcacctccgcccgtgtcccctctgtcagc
gctatggaggacagggaggctggtaccccctctaacaaagacctgagtgactggctcaga
cagcaccccacatacaccatggacatgcctactgcgtacacaccaaagagtgaggagact
ctcctctcctcccagttccccaaacccaagcaaaagagacaccgctgccggaaccccaac
aagatcgacatcaacacgctcactggagaagagagggttcccgtggtcaaccggagaaat
ggaagaaagatgggtggagccatggcccctcccatgaaggatcttcccagatggctcctg
gagaactcagattttgccgtcgctccagactggactgacattgtcaagcaatcgggcttc
ctccctgaggccatgttcgaccgtctcctgactgggccattggtgcgtgaggagggcgtc
cgtcgtcggggaagacgtcccaaatctgagatcgccaaggcaacagcggctgcctcggct
gcatcctctgggggccttaaccccctgctgataaacggcctgtttggaggcatggacctc
accagcttgcagggcctacagagcctccagagtctgcagctgcagctcatgggcttcccc
ggcatggggggggctgactctaaacacgcctcggccatgctgcctctcatgctgcctggc
atggctggtatgggcgttctgcccaacatgtttggcctgggaggcctgttcgcaagcaac
ctggctgcagcctcccctgctgcagcctccaatggcaccaacaacgaggacgattcggac
gagacatcgaagagagacgccagggagggtgaagaagagcaggataaggagaaggacgac
actggggaggaggaagagtcgagcaaggctattggggaggccgcggctctgaatgtggct
gctgccgctatggcctcctccggcatgtcggctaactccctggccttcaatcccttcctg
ctctccaccatggccccggggctcttttccccctacatgttcctgccccctggcctggga
ggtctcaccctgcctggcttcccccccactgccctgaccgacctgcagagtgccatggct
ggagccatgggggttgcctctggagctcagggccaggagaaggagcccagccaggttgcc
ctggactgccctgctgccgctatcgcagacccagagactgctgatgacagtgactcagct
gagagcctggagaagactgcagagtcctctgcgctagaagatgagacctccgcattggca
ggggaagccgactcaccggaagacctggaggaaggagaggatgcccttgaggaggaagag
aagtga
DBGET
integrated database retrieval system
