Oncorhynchus kisutch (coho salmon): 109871832
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Entry
109871832 CDS
T09179
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109871832
Enzymes [BR:
oki01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
109871832
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
109871832
Prokaryotic type
109871832
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
109871832
NCBI-ProteinID:
XP_031662548
Ensembl:
ENSOKIG00005032306
UniProt:
A0A8C7IPF6
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Position
LG27:complement(33890738..33907798)
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AA seq
551 aa
AA seq
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MHRSLLLIPASKHIWKFVTLESQRHCSFTKLVGPSSINNRTTMPAEKRKATLVKMDNTKR
QKLQAVKEGKRERVEGWLQDVVAEQRKEKKDLKFNKQRLRFLSQTQKIKQGSEGVVYWMN
RDHRVQDNWALIYAQQLALEEKLPLHICFCLVVPQNSELATIRHFGFMLRGLEEVAKDCS
ALDIQFHLLQGSVGELLPGFVADWSFGAVVTDFSPLRTPLQWVEEVKKGLPSDIPFIQVD
AHNVVPCWVASDKLEYSARTIRNKITKLLKEFLTEMPLVDKHPHTALRTAKPVDWAEALS
SLEVDRTVEEVDWAKSGTAAGIAMLESFIDLRLKNFATQRNNPNSSAVSQLSPWIRFGHL
SAQRVVLQVKCCGKSAGESVFSFTEELVVRRELTDNFCFYNPSYDSVKGANDWAQKTLKD
HAKDPRPYVYTREQLEKAQTHDKLWNAAQYQMVIEGKMHGFLRMYWAKKILEWTSSPEGA
LSIAIYLNDRYELDGQDPNGFVGCMWSICGVHDQGWAERPIFGKIRYMNYKGCTRKFDVA
QFERKYCPKDL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcagtttgttgctcattccagcatccaagcacatttggaagtttgtgacactc
gagagccaaagacactgctcctttaccaaattagtaggcccaagcagcattaataatcga
accaccatgccagcagaaaaacgcaaggcaacgttggtcaaaatggacaacaccaaacgg
cagaagctgcaggctgtaaaagaggggaagagggagagagtagagggctggctgcaggat
gtggtggcagagcaacggaaggagaagaaggacttgaaattcaacaagcagcgcctccgt
tttctgtcccaaacccagaagataaagcaaggttcagagggagtagtctactggatgaac
cgggatcacagggtccaagataactgggcgttgatctatgcccagcagcttgccctcgaa
gagaagctgcccctgcatatctgtttctgtttggtggtaccacaaaactcagagttggcc
accatccgccattttggcttcatgctgaggggactggaggaagttgcaaaggactgcagt
gccctggatattcagttccacctgctccagggctccgttggagaattgctgccagggttt
gtggcggactggagttttggggcagtagtgaccgacttctcccctctaaggacaccgctg
cagtgggtggaggaggtcaaaaaggggcttccgtcggatatccccttcatacaagtcgat
gcccataacgtggtgccctgctgggtggcatcagacaagctggagtattctgccaggacg
atccgtaacaagatcaccaagcttctgaaggagttcctcacagagatgcctttagtggac
aaacacccacacactgctctccgaaccgccaaaccagtagactgggcagaggcattgtcc
tctctggaggtggacaggacggtggaggaggtggattgggccaagtctggcactgcagca
ggcatagccatgttggaatctttcatcgaccttcgcctcaagaactttgccacgcagagg
aacaaccccaattcttctgccgttagtcagctctcgccgtggatccgcttcggtcacttg
tctgcccagcgtgtggtgctgcaggtaaagtgctgtgggaagagtgctggcgagtctgtt
ttctccttcacagaagaactggtggtgcgcagagagttgaccgataacttctgtttctac
aaccccagctatgacagtgtgaagggtgcaaatgactgggcccagaaaacgttgaaagat
cacgccaaagaccccaggccatacgtctatacccgcgagcagctggagaaagcccaaacc
cacgacaagctctggaacgcagcccagtaccagatggtgattgagggtaagatgcatggc
ttcctaaggatgtactgggccaagaagatcctggagtggacctcctcaccagagggagcg
ctctccatcgccatctacctcaacgaccgatacgagttggatgggcaggaccccaatgga
ttcgtaggttgtatgtggtccatatgtggggtccatgaccagggctgggccgagagaccc
atcttcggaaagatacggtacatgaactacaaaggctgcacccgcaagtttgacgtggca
cagtttgagaggaagtactgccccaaagacctgtaa
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