Oncorhynchus kisutch (coho salmon): 109871930
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Entry
109871930 CDS
T09179
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109871930
Membrane trafficking [BR:
oki04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
109871930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
109871930
NCBI-ProteinID:
XP_031662444
Ensembl:
ENSOKIG00005050773
LinkDB
All DBs
Position
LG27:complement(10823540..10871400)
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AA seq
1460 aa
AA seq
DB search
MASKETTAAGFVHVGRENTESIRRLIEKQSIKFVRAVKQDTKHGKSEDRILVLATWRMYL
FAVKVPAKVEVTFNFLEIRAMNTYPDHQVVIDTDKSTHSLRLQSQDHLDHMMNHINFALS
RIFNNSMYAPTICRAEGDVSDGVLQFSPDSESSVETQRTCGGFSETYAALCDYNGIGCKE
EVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVMVASMAYNTWFTKLYCTDMRIGSEVVE
QVLHTISKSSSLEELTLENVGLKSDFPQKMATALSENPASAIHSLNLAHNTLDNQGVSNL
IQLVCRLNKGLRLLNLSKTSLSSKGVMSLSQALCSSDDYSNSLLHLDLSKNPGILSGEDA
TNMYLFLAQPNCLVHLDLSGTDCTVDSLFGALLRGCCVDLAYLNLSKNCFSHRKVRETLP
VVRQFFSSAFSLTHVNLSSMKLPPDTLRALFLGLSSNPHISDLHLDLSCCELRSAGAGVL
QELFPRVACIGSLDISDNGLDADLLGVIPAFSRHPSLKHLLLGKNFNIKGRVLDEILQKL
VQLVQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDLSGNSLEDAGAKMLSKAL
QINTTLRSVTWDRNNTTATGFQDVARALEHNFTLHYMSIPLNDVTQAYRSAPEKIDQALT
KIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQVCALRGSEEGEELQ
AARQVLKEARNSRALYPSLCELAHVLSVDGPVRQKLDSLAGELAKAADKELQVIVDSMVS
LCRELCPMSSSSAERLNPPLSSVSERVSIPRSTIRTALMERAAQDINRALEDVKLSVVSY
LTNSIVDQILQELYTTHKTLLCQVSQAKRLDDAGTGRRTIRQSRITDSLDFPDEEGLGMN
IDTIAIKKRSSRTRRIRPVSTRLSLGDDPTSSPTHSGPLSRSASWEDLYTLPTQGAPLRH
VTQVRPRPPRRHCRGQVPVETHCSENGGVNMLEDGLPDFYTKRVLPGSQLSLLHQAQSLR
RKKRRSVLSIFSGFRKNRSSTISNQETDSGSENVYSMIQHPKDRGKGEAIIEVGANGRMM
PSPRPIQGTPLPGMRGGRPSPHCLTQRQPSDLVGMVYNCIGAEDEDSDSSFEIRPVGRDT
DRQKDTPIASDTQTESRANGHAMSSASLTDKQADIQTDRQTDRQTEPVCQDLPMPSTQTD
TQTEVERRTKETEGTESLEDRKEGAPCGQKPEPPSQSSKPSLASIKQRHLQGSSEKSTDG
IGWTEGDRVEEENNEKRREGVQKERGAEGQRPPIPEKPGRDKTSPKTLPPVTPPEETTNE
KKTTPPVPPASAKPSFDLSQAPVSQDEGTNEKKSLPPVPPASTKPVFDSPDHAGCQDEAG
GRNGYPLKPHRNRKADSCDMGMCEGMERNSPNDLETGSSDRKPPVKRPRLPENRNRSLDF
PRTVCPESPEPANDNGVTSS
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagagaccaccgctgcaggtttcgttcacgtcggcagggaaaacacagag
agcatcaggaggctcattgagaaacaatctatcaagtttgtgcgagctgtaaagcaggac
accaagcacggcaaatcagaggacaggatactggttctggcaacatggcgaatgtaccta
tttgctgtcaaagtccccgccaaggtggaggttactttcaacttcctggaaattcgagca
atgaacacttatccagatcatcaggttgtcatagacacagacaaatcgacccactccttg
agactgcagtcacaagaccaccttgatcacatgatgaaccatatcaactttgccctctca
cgaatattcaataactccatgtatgctccgaccatctgccgagcagagggggacgtctct
gatggagtcctccagttttcaccagactccgaatcatctgtggagactcagagaacctgt
ggcggtttctctgagacctacgcagctctgtgcgattataacggcatcggctgtaaggag
gaagtgcagtgggatgtggacactatctatcactctcaggacaacagggagttcaacctg
ctggacttcagccacctggacagcagggacctggcggtgatggtggcttccatggcgtac
aacacttggttcaccaagctctactgcacagacatgcgcattgggtcagaggtggtggag
caggtccttcacaccatcagtaagtccagcagtctggaggaactcactctggagaacgtt
ggcctcaaatcagacttccctcagaaaatggcgacggctctgtcagagaatcctgcctct
gcaatccactctctcaacctggcccacaacaccttggacaaccaaggagtgtccaacctc
atccagctggtgtgtcgtctcaacaaaggccttcgtctgctcaacctctctaagacgtcc
ctctcctccaagggagtgatgtctctctcccaggccctctgctccagtgatgactactcc
aactctctccttcacctggacctgagcaaaaaccctgggattctgtctggggaggacgcc
acgaacatgtacctgttcctagcccagccaaactgtctggttcatttggacctctctggg
accgactgcactgtggactcgttattcggcgctctgttgaggggatgttgtgttgatctc
gcttacctgaatctctccaagaactgcttctctcacaggaaagtgagggagactcttcct
gtcgtcagacagttcttcagttcagccttcagtcttacgcacgtcaacctgtcttccatg
aagctccctccggacactctgagagctctcttccttggcctgtcttccaaccctcacatc
agtgacctacacctggacctcagctgctgtgagttgaggtctgctggtgctggggtgctc
caggagctgtttcccagagtggcctgtattggtagtctggacatctcagacaacgggttg
gatgctgatctgctaggggtcatcccggccttctccagacacccttccctcaaacacttg
ctgctgggcaagaacttcaacatcaagggcagggtgctggatgaaattctgcagaaacta
gtgcagttagtgcaggaggaagagtgtgccctgcagtccctctctctggcggactcgcgc
ctgcgctctcggggcacagtgctggtgaacgctctgggcagcaacacctgcctgcgcaag
gtggacctgagtgggaacagcctggaggatgcaggggctaagatgctcagcaaagccctg
cagatcaacaccacactcaggagtgtgacgtgggatcgcaataacaccacggctacagga
ttccaagatgtggctcgggccctggaacataacttcaccctgcattacatgtccatcccc
ctcaatgatgtcacacaggcttaccggagtgcccctgagaagattgaccaagcgctgacc
aagatccagcgtgctctgttgaggaacaaccagacccagaggttctctcagaaacaggct
cttcgtctgcaccaaggcctggtcaccagcactgctgaacaggtgatggagcggctgtgt
gtgcgtgtgcagcagcaggtgtgtgctctccgaggctcagaagaaggagaggagttgcag
gctgccagacaggtcctgaaggaggccagaaactcccgtgcgctctatccatctctgtgt
gagctggcccatgttctctcagtggacgggcctgtcagacagaaactggactctctagca
ggagagctggccaaggctgctgataaggaactacaggtgatagtggactccatggtgtct
ctgtgtcgggagctgtgtcccatgtcctcctcctcagctgagcgactcaaccctccgctc
tcctccgtctcagaacgtgtctccatccctcgctccaccatccgcaccgccctgatggag
agagcggcacaggacatcaacagagccctggaggacgtaaagctgtcggtggtctcctat
ctgaccaactccatagtggatcagatccttcaggagctctacaccactcacaaaaccttg
ctgtgtcaggtgtcccaggcgaagcgtttggatgacgcagggacaggcaggcgcaccatc
agacaatccagaatcacagactcactggacttccccgacgaggaaggcctgggcatgaac
atcgacaccatcgccatcaagaaacgtagctccagaaccagaaggattcgtccggtgtca
accagattgagtcttggtgatgatcccacctcctccccgactcactctggccccctatcc
cgctcagcatcatgggaggatctgtacaccctgcctacccagggtgcaccactgcgccac
gtgacacaggtcaggccacggcccccgcgaagacactgtcgaggacaagtccccgtggaa
acacactgttcagagaacggaggagtcaacatgctggaggatggactgccagatttctat
accaagagagtcctgcctggcagtcagctgtcactactccatcaagctcagtccctgagg
aggaagaagagacgcagtgtgctgtcgatcttctctgggttccgcaagaaccgcagctcc
accatctccaatcaggaaacagatagtggctcagagaacgtgtactctatgattcagcat
cctaaggatcgtgggaagggggaggccatcattgaggtgggagccaatgggaggatgatg
ccgtcccctaggcccatccagggcacaccactgcctgggatgagggggggcaggcctagc
ccccactgcctcacacagagacagccttcagatctggtcgggatggtatacaattgtatc
ggagcagaagacgaggactcagacagtagctttgagatcagaccagtgggcagagacaca
gacagacagaaggacacgccgattgcatcagacacccagacagagtcccgtgccaatgga
catgcaatgtcctccgcttctctgacagacaaacaggctgacatacagactgacagacag
actgacagacagacagagccagtctgtcaggacctgccgatgcccagcactcagacagac
acacagacggaggtggagagacggacaaaggagacagaggggacggagtccttggaggac
aggaaggagggtgccccctgtggacagaaaccagaacccccttctcaaagcagcaagccc
agcctggccagcattaaacagagacacctgcagggaagctccgagaaatcaactgatggt
ataggatggacagagggagacagggtagaagaggagaataatgaaaagagacgtgagggt
gtgcagaaagaaagaggggcagaggggcagcggccccccattcctgaaaagcctggtaga
gataagacctctccaaagacactgcctcctgtcactccgcctgaggaaaccaccaatgag
aagaaaaccacacctcctgttccacctgcctctgccaagccctcttttgatttgtctcaa
gctcctgtcagtcaagacgaagggactaatgagaagaaaagccttcctcctgtgcctcct
gcttctaccaagcctgtgtttgactctcctgatcatgctggttgtcaagatgaggcggga
ggaagaaatggttatccactgaagccgcatcgcaacaggaaggcagactcatgtgacatg
ggtatgtgtgagggcatggaacggaatagccccaacgatctggagacggggtcctcagat
cgcaaaccccctgtgaaaagacccagactcccagagaacagaaacagatctctggacttc
cccaggactgtctgtcctgagagtccagagcccgccaacgacaatggtgtgacgtcgtca
taa
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