KEGG   Oncorhynchus kisutch (coho salmon): 109871947
Entry
109871947         CDS       T09179                                 
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109871947
   04121 Ubiquitin system [BR:oki04121]
    109871947
Enzymes [BR:oki01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109871947
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109871947
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109871947
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-C3HC4 KH_BICC1_1st KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Prok-RING_4 CR_prot_dom_plant Mito_fiss_reg zf-RING_5
Other DBs
NCBI-GeneID: 109871947
NCBI-ProteinID: XP_020318578
Ensembl: ENSOKIG00005039248
LinkDB
Position
LG27:8502379..8511529
AA seq 651 aa
MPSPLFHPEIMDHDMVVSSQHNGVSLPRETDQESRDEDHQDALRFALDQLSFMALEKVDC
GGGGLVDTLDGNQGPCSGNSNGGYVDLQMLEHQGGSRDSPTSCSPSPEYYGSGGYHMTGP
HSHPMLGEQSSVLCNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPV
RGEEPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGATGTGAPGTGGVLPGPPHL
PGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVDRA
REEIETHITLRTGAFVDLQGDNDFHTNGTDVSLEGLGSLAGGLGAALWARANNAHPAPPP
PPPPPPPPLPMAMHQSSGRKLSSSASYHQHNGGMGSESYSAPRRATEGGSPTSPFSTSSS
NAGGGGGFTFGGDSTPGLPSEELGFEFSASNIWAPFVNGGGGKIPGTSQKQPLRRNSSGL
SGGAITPRLSPTLPSDAVVGPLDHPLARRAQSDPLSTLSWLQSGGAGAGSFSGASSSSSG
GSSTGYSSCSASSLPGGSPTDSEGGGSGLGSGMLGRLKAAAGAGSGGLVCMGPGGVSRDC
FVCFESEVTAALVPCGHNLFCMDCAGQICQSAEPECPVCHTTATQCIRIFS
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgcctagccccttattccaccccgagattatggaccacgacatggtagtgagcagccag
cacaacggggtcagcctgccgcgagagactgaccaggagtcccgggacgaggaccatcag
gatgcgctccgcttcgccctggaccagctgtcatttatggccctggagaaggtggactgt
ggtggtggggggctcgttgacacgctcgacgggaaccagggaccgtgctcggggaattcc
aacggcggttatgtcgacctgcagatgctggagcaccaagggggttcccgggactccccg
acatcctgctccccgtctccagagtactatggatcgggcgggtaccacatgactggcccg
cactctcaccccatgctcggtgaacaaagctcagttctctgcaatcgcaagaggagtgtc
aacatgaccgaatgcgtacctgtgcccagctcagaacacgttgctgaaatagtgggaaga
cagggctgtaagatcaaggcactgcgtgcgaagaccaacacctacataaagaccccggtg
agaggcgaggagcctgtgttcatagttacagggcgcagggaggacgtggagatggccaag
cgggagatcgtctctgcggccgagcacttctccatgatccgggcatcccgctgcaaggct
ggggccacgggcacaggagcacccgggacagggggagtgctccctggacccccccacctg
cctggacagaccactatacaggtgcgcgtaccgtatcgtgtggtggggttagtggtgggg
cccaagggggcgaccatcaagcgcatccagcagcagacgcacacctacatcgtgacgcct
agcagggagaaggaccccgtgtttgaggtgactggcatgcctgagaatgtggaccgagcc
cgggaggagattgagacgcacatcaccctgcggaccggggcctttgtggacctccaggga
gacaacgacttccacactaacgggactgatgtcagcctagagggcctgggctcgctggct
ggggggctgggcgctgctctctgggctcgggccaacaacgcccaccctgcccctccaccc
ccgccgcctcctccaccacccccgctccccatggccatgcaccaatcgtctgggaggaag
ctgtcctcctcggcctcctaccaccaacacaacggagggatgggctctgagagctacagc
gcccccaggagggccaccgagggaggtagtcccaccagcccattcagcactagctccagc
aatgccggcggaggaggggggttcaccttcgggggtgactccaccccaggcctcccctct
gaggagctgggctttgagttcagcgcctccaacatctgggcccctttcgtcaacggagga
ggagggaagatcccaggtacctctcagaagcagcctctccgcagaaacagcagcggcctg
agtggcggtgccatcaccccccgcctgtcccccaccctgccctctgatgcagtggtggga
cccctggatcatccactggcccgtcgtgcccaaagcgacccactcagcaccctctcctgg
ctgcagtcgggcggtgccggtgcagggtccttctctggagcatctagctccagctccgga
gggtcatccaccggttactcctcctgctcagcctcctccctgcccggaggctctcccacc
gattcagagggcgggggcagtggcctgggctctggcatgctgggccggttgaaggccgcg
gcaggcgctggttctggaggtctggtttgcatggggccagggggtgtgagcagggactgc
tttgtgtgctttgagagcgaggtgacagcggctctggtgccatgcggccacaatctgttc
tgcatggactgcgccggacagatctgccagtccgctgagcccgagtgccctgtctgccat
accactgccacacagtgcatccgtatcttttcctaa

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