Oncorhynchus kisutch (coho salmon): 109871982
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Entry
109871982 CDS
T09179
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109871982
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109871982
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109871982
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C64
109871982
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
109871982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
109871982
NCBI-ProteinID:
XP_020318627
Ensembl:
ENSOKIG00005036644
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All DBs
Position
LG27:complement(24491487..24498777)
Genome browser
AA seq
1190 aa
AA seq
DB search
MSLLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQNNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEHEHVSTVGYGKDRSGSLIYLHDTLEEIKKANSNKECIIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTLLPKLPPRLLPKAWGVPQELIKKYIN
LEQDGSCVIAGDRSLQDKYVMRLVNAMEEIFMEKHGIHPSLVADVHQYVYRRTGMIGVQP
EEVTEAARKSVMENRLHRCLICNALSELHVLPEWLAPGGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCSYDPEKDILIPDYKLSTLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVEVTLNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDVVEIQQAVDTQP
PTKIILTGQKSKTIHKEELTMSKAERSLQQSISEQALVTQKRRTDRLKQEQKGVQGHGRP
SSPSATQEPSSSAPATPTKSSFSPTSSKEKKIRVTTSDGRQAMLTLQAQTTFSELQRSIA
NEFIVSPAQQCIRHGFPPKELLSPKDGEENEPVALQHGDRVTVEILRGPEDHKVSTPSAS
SSHSSLHSLHSVKSDDTVTSSRMNTSRELQENIDLEMSSLCLLATLMGEDVWSYAKKLPH
LFQQGGVFFNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEECLELCVDAAGHFPVGPDVE
DLVKEALVQLRSEAASRSREGSPSHSLLRLGSGGVVRKKEQLQSVNAFQGKGHSLGSAPG
GSPPEHKPITRQHSSGVDLSASVSKGPDLSDISEDATKELVRMAPGFVTMKDSRHLDPSM
IEEQRKKLQEMVSSIQASMDRHLREQSNAGAGTGGPAERTSGAKMSPSQSTPGVGEQEAS
SMDVSTAGAHGTPVKAGNKPDGKDAGSEELEEMDSQDAEHTNALEPMDHS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctacaaggctcaaagaaaaaggacaagcgtattttgtccggtacctgccca
gacccgaaatgccaggcgaggctattcttccctgcttacggctcgatcagcattgaatgc
actgaatgtggccaacgccacgaacagaataatcttttaaacgtggaagaagtaactgat
ccagacgttgtactgcacaatttgttaagaaatgccctactcggtgtcactggagcccca
aagaagggaaccgagctggtgaaagtgatggggctttccaactaccattgcaagctcctc
tctcctattctcacaaggtatggaatggataagcagacgggaaaagcgaaactgctgagg
gaaatgaatcaaggagagatgttcgactgctcacttctaggtgatcgggcgtttctaatc
gaacatgagcatgtatctacagttggctatggtaaggacagatccgggagcctgatatac
ctccatgacactttggaggagattaagaaagctaacagcaacaaagaatgcataatacct
gttcatgtggatggagatggacattgccttgttcatgctgtgtccagggccctggtaggc
agagaactgttctggcatgccttaagagagaatttgaaacagaatttcaagcaaaatctg
gatcgctacaaggcactctttcaggattttattgatgcagctgaatgggaagacatcatc
aacgaatgtgaccccctttttatcccaccggagggtgtgccactgggacttcgaaacatt
cacatatttggcttggctaatgtgctgcaccgccccataatcttgttagattcactgagt
ggaatgaggagctctggggattactctgcaacttttctccctgggcttgtaccggaagag
cagtgcaagggaaaagatgggaagttcaacaagcctatatgtatcgcctggagtagctct
gggcgtaaccactacatccctcttgtcggaataaaaaacaccctcctccccaagctgccg
cccaggcttctccccaaagcttggggggttccacaggagctcatcaagaagtacattaat
ttggaacaagacgggagctgcgtcatcgcgggagaccggagcttacaagacaagtatgtg
atgagactggtcaatgccatggaggagatcttcatggagaagcatggaatccacccctcc
ctggtggcggacgtgcatcagtacgtttacagacggaccggtatgatcggcgtccaaccc
gaagaggtgacggaggctgccaggaaatcagtcatggaaaaccggcttcatcgctgtctg
atctgcaatgcactctctgagcttcatgttctacctgagtggctggctccaggtggtaag
ctctacaacctggctaaatccacccacgggcagctcagacccgacaagaactacagcttt
ccgttgaacaatgtggtctgctcttacgacccagagaaagacatcctcattcctgactac
aaactaagcaccttgaacacctgcaactggtgccacggcacctcagtgcgccacatccat
ggcaatggctctgtggtgtacttagatggagacagaaccaacacccgctcccagggggga
aagtgcggctgcggcttcaagcactactgggaaggaaaggagtatgacaatctgccagag
gctttccccatcactctggagtggggtgggcgtgtcgtgcgggagacagtgtactggttc
cagtatgaggttgaggtgaccctgaacagcaacgtctatgatgttgccatgaaactggtt
accaagcatttccctggggagtttgggagtgagctcctagtgcagaaagtggtgaacacc
attttgcatcacactgccaagaagaacccagatgagtataacccagtctccattgacggt
gcgcatgctcagagactcacagacgtggtggaaatccagcaggccgttgacacacagcca
ccgactaagatcatactaactgggcagaaatcaaagaccattcacaaagaggagctaacc
atgagtaaagcagagcggagccttcagcagagcatcagcgaacaggccctagtgacccag
aaaaggaggacagatcgactgaagcaggagcagaagggagtccagggacatgggcggccg
tcctctccgagtgctactcaggaaccttcctcatccgctccagccacgcccaccaaatct
tccttctctcccacttccagcaaggagaagaagatccgtgtcaccactagcgacgggcgg
caggccatgctcactctacaggctcaaactaccttttctgagctccagaggagcattgcg
aacgagttcattgtgtctccagcccagcaatgtattcgacatgggtttccccccaaagaa
cttttatctcccaaggatggagaggagaatgagcctgtggctctccaacatggggacagg
gtgactgtggagatcctgagaggtccagaggatcacaaggtttccaccccaagtgcttcc
agttcccattcatccctgcattccctccactctgtgaagagtgatgatacagtgacttcc
agcagaatgaatactagcagagagctgcaggagaacattgaccttgagatgtcctccctc
tgtctcctagcaaccttaatgggagaagatgtctggtcatatgcaaaaaaactgcctcac
ttattccagcaaggtggagttttcttcaacattgtgaagaaagatatgggcctgatggat
ggcaagcactgcaccctcccacacttgactggaaagacgtttgtgtacaacgcagcagag
gagtgtctggagctgtgtgtggatgcagcgggacacttccccgtgggccctgacgtggag
gaccttgtcaaggaggccctggtgcagctccgctctgaggctgcctccaggagtcgggag
ggaagcccctctcacagcctgctgaggctcggaagtggaggtgtggtgcgcaagaaggag
cagctccagagtgtcaacgccttccaaggtaagggccactccctgggcagcgccccaggc
ggctctccccctgaacacaagcccatcacccgccagcacagcagcggggtggacctgagc
gccagcgtctcaaagggacctgacctctctgacatctcagaagatgcaaccaaggagctg
gtgcgcatggctcctggtttcgtcaccatgaaagacagccgacacctagaccctagtatg
atcgaagaacagaggaaaaaactacaggagatggtctcatccatccaagcctccatggac
aggcacctgagggagcagagcaatgcaggggcaggcactgggggccctgcagagaggaca
agtggggctaagatgagtccttcccaatctaccccaggggtaggtgaacaggaagcctct
tctatggacgtatctactgctggtgctcatggcacaccagtgaaggcagggaacaagcct
gatggaaaggatgcagggtcagaggagctggaggaaatggatagccaggatgcagagcat
accaacgccctggagccgatggatcattcctga
DBGET
integrated database retrieval system
