Oncorhynchus kisutch (coho salmon): 109872113
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Entry
109872113 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109872113
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109872113
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109872113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_5
Ank
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
109872113
NCBI-ProteinID:
XP_031662346
Ensembl:
ENSOKIG00005028928
UniProt:
A0A8C7I321
LinkDB
All DBs
Position
LG27:complement(13017092..13108984)
Genome browser
AA seq
1043 aa
AA seq
DB search
MTTGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRIFDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIYTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEGVAAGAEGGSSQFLVGDLVQICYDIDRIKLLQRGHGEWA
EAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPAGSAVTNASGERLSQLL
KKLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDV
LKLLLKHNVDLEAEDKDGDRAVHHASFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVN
KGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNA
LHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASL
DIQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQ
DMQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLC
PDPSLCKALAKCHKEKTSGQVGSRSPSLNSNGETLEECMVCSDMKRDTLFGPCGHIATCS
LCSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFEPCGHMCACENCASLMKKCVQCR
AVVERRTPFVLCCGGKGMEDDAADDDDDDDEDDEDLTGSSNSALMAGGSQQDLLQPNNLA
LSWSSGNIPAMQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTCQ
LCGDRMSECPICRKAIERRILLY
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgactactggcaggaataaccgtgtgatgatggaaggagttggtgcgagagtgatccgt
ggacccgattggaaatggggaaaacaggatggtggagagggacatgtcggcaccgtcagg
agtttcgaaagtccggaagaagtggttgttgtctgggataacgggactgcggccaactac
cggtgctctggtgcatacgacgtgaggatatttgacagtgctcccacaggtatcaagcat
gacggtactatgtgcgacacctgccgtcagcagcctatcatcggtatccgctggaagtgt
gcggagtgcaccaactatgacctctgtaccacctgttaccacggagacaagcaccacctg
cgacaccgcttctacaggatcaccacccctggaagcgagagagtcctgttggagtctcgg
cgcaagtcgaagaagatcacagcccgaggcatctacacaggtggccgggtggtgagggga
gtggactggcagtgggaggaccaggacggaggcaacggcaggagaggaaaggtgacagag
atccaggactggagtgcagccagcccccacagtgcagcctacgtactctgggacaacggg
gccaagaacctctacagggtgggcttcgaggggatgtcggatttgaaatgtgtccaggat
gccaaaggaggctctttctacagagaccactgccctgttctaggcgaacagaatggcaac
aggaacccaggcggtctgcagattggagacctggtcaacatcgacctggacctggagata
gtccagtccctgcagcacggccacggaggctggacagacggcatgttcgagaccctcacc
accaccggtaccgtgtgtggaattgacgaggaccacgacattgtggtgcagtaccccagc
gggaacaggtggacgttcaaccctgcggtgctgaccaaagccaacgtggtgcgtagtggg
gaaggtgttgcggcgggggcagagggcggcagctcccagttcctggtgggagacctggtc
cagatctgctacgacatcgaccgcattaaactgctgcagagaggacacggggagtgggcc
gaggccatgctgcctaccctgggcaaggtgggccgcgtgcagcagatctactcagacagt
gacctgaaggtggaggtgtgtggaacatcatggacctacaaccctgctgccgtcaccaaa
gtggcccccgctggttccgctgtcaccaatgcatccggagagcgtctgtctcagctgctg
aagaagctgtttgagacccaagagtctggtgacatcaacgaggagctggtcaaagcagca
gccaatggcgacctggccaaggtggaggacatcctcaagagacctgacgtggacgtgaac
gggcagtgtgctggacacacagccatgcaggcggccagtcagaacggacacgtggacgtc
ctcaagctgctgctgaaacacaacgtggacctggaggccgaggacaaggatggagaccgg
gcggtgcaccacgcgtccttcggagacgagggctccgtgatcgaggtgctgcagaggggc
ggggccgacctgaacgccaggaacaagcgccgacagacccccctgcacatcgctgtcaac
aagggccatctgcaggtggtcaagaccctgctggactttggctgccaccccagcctccag
gactcagagggagacacccccctacatgatgccatcagtaagaagagagatgacatgctg
tctgtgctgctggaggcgggtgcagatgtcaccatcaccaacaacaacggtttcaatgcc
ctgcaccacgctgccctccgagggaaccccagtgccatgcgtgtgttgctgtccaagctg
ccgcggccctggatcgtagacgagaagaaggacgatggttacaccgccctgcatctggcc
gcactcaacaaccacgtggaggtggccgagctgctggttcaccagggcagtgccagcctg
gacatccagaatgtaaaccaacagacggccctgcacctggctgtggagagacagcacaca
cagatagtcaggctgctggtgcgagcggaagccaagctggacgtgcaggacaaggatggg
gacactcctctccacgaagcgctgcgtcaccacacgctgtcccagctccgccagctgcag
gacatgcaggacgtcagcaaggtggagccctgggaaccatccaaaaacacgctgatcatg
ggcctgggcacccagggagcagagaagaagagtgcagcgtccatcgcctgcttcttggct
gctaacggagcagacctgaccatccgcaacaagaagggccagtcccctctggacctctgc
cccgaccctagcctctgtaaggccttggccaagtgccacaaggagaagaccagtggccag
gtgggctctcgcagcccatctctgaacagtaatggtgagaccctggaggagtgtatggtg
tgttctgacatgaagagagacaccctgttcggaccgtgcggacacatcgccacctgctct
ctctgctccccccgcgtcaagaagtgtctcatctgcaaggaccaggtccagtccagaacc
aagattgaggagtgcgtcgtgtgttccgacaagaaggctgccgtgctcttcgagccctgc
ggtcacatgtgcgcttgtgagaactgtgccagcctcatgaagaagtgcgtacaatgccgg
gctgttgtggaacgccgcacgcccttcgtcctgtgttgtggagggaaaggtatggaggat
gatgcagctgatgatgatgatgatgatgatgaggatgatgaggaccttacaggtagctct
aactcagctctaatggcaggggggtcgcagcaggatctgctccagcccaacaatctggcg
ctaagttggtccagcggtaacatcccagccatgcagagagacaaagacaacaccaatgtc
aacgctgacgttcagaagctgcagcagcaactgcaggacatcaaggagcagaccatgtgt
ccagtgtgcctggaccggctgaagaacatgatcttcatgtgtggccacggcacctgccag
ctgtgtggcgaccgcatgagcgagtgccccatctgccgcaaggccatcgagagacgcatc
ctcctctactag
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