Oncorhynchus kisutch (coho salmon): 109872146
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Entry
109872146 CDS
T09179
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109872146
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109872146
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109872146
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109872146
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109872146
NCBI-ProteinID:
XP_020318847
Ensembl:
ENSOKIG00005041778
UniProt:
A0A8C7N1P2
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All DBs
Position
LG27:complement(8851337..8868291)
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AA seq
503 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTSRN
RCQHCRLQKCLVLGMSRDAVKFGRMSKKQRDSLYAEVQKHQKNQECLNQGLPLSREDVAG
GESKGDRHGELSRSYSSGGSSSTLSDLDDIAALPKLFDLPLTPQEAHEYCSLDLQEDHGG
STGNTSNSSSPSSSSPISSNQNSPQQNLLDVTDANGIKHEYQMLSHTHVLLAHTHATLLE
TLPDDCTLMDIERITQSVVKSHLETSQYSSDELKRLTYNRMQYSPEETRNFQCGSAESVW
QQCAHHITNSIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNATTNTMF
FNGKFASAQLFKALGCDDLVSAVFDLAKGLSRLQLTDEEMALFSAACLLSPDRPWLADSQ
KVQKLQAKVYLALQHSLHMSGAADEKLDQMVSKLPIMKSICNLHIDKLEFFRLVHPETAY
SFPPLYREVFGSEISLPDSTNNS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtaataccctgcaagatctgtggggacaagtcctcaggaatc
cactatggagttattacctgtgaaggctgcaaggggttcttccgccgcagccagcagaac
aatgccatgtactcgtgttcccgccagaggaactgtcttattgaccgaaccagccgcaac
cgctgccaacactgcagactgcagaagtgtctggtgttaggcatgagccgggacgcggtg
aagtttggccgtatgtctaagaagcagcgcgacagcctgtacgctgaggtccagaagcac
cagaagaaccaggagtgtctgaaccagggtctgccactgtccagggaagatgtggctggg
ggagaaagcaagggggacaggcacggggagctcagtcgctcctacagcagcgggggctcc
agctccaccctgagtgacctggatgacatcgcagcgctccccaaactgtttgacctcccc
ttgaccccacaggaggcccacgagtactgcagcctggacctgcaagaagaccacggcgga
agcactgggaacacctccaattcttcatcaccatcatcatcctcgcccatttcgtccaat
cagaattctccccagcaaaatctactggatgtcaccgacgccaatgggatcaaacacgag
taccagatgttgtcgcacacacacgtgctcctggcacacacacacgccacactgctagag
acactgcctgatgactgcactcttatggatatagagcgtatcacccagagtgtggtcaag
tcccacttggagacgagtcagtacagctctgacgaactgaagaggctgacatacaatcgg
atgcagtactcacctgaggagactcgcaacttccagtgcgggtctgcagagtctgtgtgg
cagcaatgtgcccaccacatcaccaattccatccagtacgtggtggagtttgccaaacgc
attacaggcttcatggacctgtgtcagaatgaccagatcattctgctcaaagcaggctgt
ctggaggtgctgttgattaggatgtgcagggcatttaacgccaccaccaacaccatgttc
tttaatggcaaatttgcctctgctcagctcttcaaagccctcggttgcgatgacctggtt
agtgccgtgtttgacctggctaaagggctctcccgcctgcagctgaccgatgaagagatg
gctctgttcagtgccgcttgcttgctgtccccagaccgaccatggttagccgacagccag
aaggtccagaagctacaggcgaaggtctacctggctctgcaacacagtctgcacatgagc
ggggctgccgacgagaagctagaccagatggtatccaagctgccgataatgaagtccatc
tgtaatctccacatcgacaagctggagttctttcgtctggtccacccagagaccgcatac
agcttcccaccactctaccgggaagtgtttgggagtgagatctctctccccgactctaca
aacaactcctag
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