Oncorhynchus kisutch (coho salmon): 109872204
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Entry
109872204 CDS
T09179
Name
(RefSeq) contactin-associated protein-like 2
KO
K07380
contactin associated protein-like 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecule (CAM) interaction
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109872204
04517 IgSF CAM signaling
109872204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109872204
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
109872204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
COLFI
Syndecan
Motif
Other DBs
NCBI-GeneID:
109872204
NCBI-ProteinID:
XP_031662797
Ensembl:
ENSOKIG00005020306
LinkDB
All DBs
Position
LG27:complement(20336074..20391469)
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AA seq
1314 aa
AA seq
DB search
MLPGKELTLLLWIFSRFSSLSAASSASRKCDEALATPLSHTAFTSSSVYSSGYGAGYAKL
NRRGGAGGWSPVDTDHYQWLQVDLGTRKQVTSIATQGRYSSSDWTMQYRLLYSDTGRNWR
PYLQDGNIWAFSGNSNSESVVRHDLQHAVITRYVRIIPLEWSEEGRIGLRVEVYGCSYWA
DVINFEGQGVISYRFKMKKMKILKDVISLKFKTTASNGVLLHGEGQQGDYISLELKRSKL
LLMINLGSNQYGSILGHTSVTSGSLLDDDHWHSVIIERYRRNVNFTLDRHTQHFRTNGEF
DHLDLDYEISFGGMPVSAKPSSGGRENFVGCMEGITYNGDNITNLVKRKKIDTSSFRNLT
FSCSEMHSFPVFFNATSFLRLPGLQDSDTLSVSLSFRTWNPSGLLFYTALADGVVEVGLT
EGKVTVYINVAQKKNTRIDISSGSGLNDGQWHNVYLHALENYAMLTIDGDEASTVRTVIP
IQIRTGGQYYFGGYFLRTNTPPAQRSFQGCMQLIHVDDQLADLVAVEQGNMGTFENVSLD
MCAIIDRCVPNHCEHGGRCTQTWDSFRCSCNGTGYTGATCHTSVYEQSCEEYKHLGKTSG
TYWIDPDGSGPVGPFKVNCNMTEDKVWTTVRNNLSPQTSVSGSDLERKALLQLNYNMSTE
QVTAITSSAEYCEQHVAYACRMSRLLNNPAGSPFTWWVGRANERHYYWGGSGPGIQKCAC
GIERNCTDPKYYCNCDADQTRWREDAGLLVYKDHLPVSQVVVGDTNRAGSEAKLTVGPLR
CQGDGNYWNAASFNTPASYLHFPTFQGETSADISFYFKTSSSYGVFLENLGNTDFIRLEL
KAATVVSFSFDVGNGLVELSVRSSTPLNDDQWHRVVAERNVKEAVLQLDGQFKEVRPAPP
QGHTRLELYSQLYVGASGGQRGFLGCIRALKMNGVTLDLEERAKVTPGVKPGCSGHCTSY
GQHCRNGGQCMEKYNGYSCDCTLTAYDGPFCTEDVGGYFESGTLVRYDFLPEGGLPAIRD
VKSLSPLLPTEGNLTQEELVFSFSTSNTPSILVYISSRTQDYLAVVLRHNGTLQIRYSLG
GLREPFTIDLDQRNMANGQPHHINISRQERNIRLQLDHYPPVSYTLPAGSDTKFNLVKTI
FLGKVFETGQIDPVLIEKYNTPGFVGCLSRVQFNNIAPLKAALRSGIVAPVTTQGILVES
NCGASPLTISPMAAANDPWHLDSAGAVFPFNEERVSRDGVDRNAAIIGGIIAVVIFTILC
TLVFLIRHMFRHKGSYHTNEAKGAESADCADAAIIVNDPAFTETIDESKKEWFI
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgggaaaggagctaacgttactgctctggatcttcagtcgcttcagcagcctc
agcgcggcatcttcagcatcccgtaaatgtgatgaagcgttggccacaccactctctcac
acagcttttaccagctcttctgtgtactccagtggatatggggctggatacgcaaagctc
aacaggagaggaggtgctggaggctggtctcctgtggacactgatcattaccagtggctg
caggtggacctgggaaccaggaagcaggtcacctccatcgccacacagggcaggtacagc
agctctgattggacaatgcaatacagactcctgtacagtgacacaggaaggaactggaga
ccatatctgcaagatggcaacatatgggcattttctggcaactccaacagtgagagtgtg
gtccgccatgatctgcagcatgcagtcataacacgctacgtgcgcatcatcccactggag
tggagcgaagaggggaggattggcctgcgagtggaggtctatggctgttcttactgggcg
gatgtgatcaacttcgaaggccagggtgtgatctcctaccgcttcaagatgaagaagatg
aagattttgaaggatgtcatctccctgaagtttaagaccacagccagtaacggtgtgctc
ctgcacggggaaggacagcaaggagactatatcagcctggagctgaagagatccaaacta
ctgctcatgatcaacctgggcagcaatcagtacggctccatcctcggacacacctctgtg
acaagcggaagtttattggatgatgaccactggcactccgtaattatcgagcgttaccga
cggaatgtcaactttaccctggatcgccacacacagcacttccgcaccaacggggaattt
gatcatcttgacctggactatgagatcagctttggaggcatgcctgtctctgccaagccc
agctcgggaggcagggagaactttgttggttgcatggagggcatcacctacaacggagat
aacattaccaacctggtcaagagaaagaaaattgatacttcaagttttaggaacctgacg
ttctcctgcagcgagatgcactccttccctgtgttcttcaacgccaccagcttcctgcgt
ctcccggggctgcaggacagcgacaccctgtcggtcagcctgtccttccggacgtggaac
cccagcggcctgctcttctacacggccctggctgatggcgtggtggaggtgggcctcaca
gagggaaaagtcaccgtctacatcaacgttgcccagaagaaaaacacacgtatagacatc
tcctcaggttcggggctcaacgacggccagtggcacaacgtctaccttcatgctctggag
aactacgccatgctgaccattgatggtgacgaggcatccactgtcagaacggtcattccc
attcagatcagaacagggggacaatactactttggaggctacttcctgcgtaccaacacg
ccccctgcccagcgctctttccagggctgtatgcagctgatccacgtggacgaccagctc
gctgacctggtggctgtagagcaaggcaacatgggaacctttgagaatgtcagcctggat
atgtgtgccatcatagacagatgtgtccctaaccactgtgaacatggaggccgctgcact
cagacctgggacagtttcaggtgctcctgcaatgggacaggctacactggggctacatgc
catacctccgtgtatgaacagtcctgtgaggaatacaaacatcttggtaaaacatctggc
acgtactggatcgaccctgatgggagtggtcccgtaggccccttcaaagtcaactgcaac
atgactgaggacaaggtgtggactacagtgagaaacaacctgtctccccagacctcagtg
agtggctcagacttggagaggaaggctttgctgcagctcaactacaacatgtccacagag
caggtgacagccatcacgagcagtgcagagtactgtgaacagcatgtagcctacgcctgt
cgaatgtctcgactgctcaataacccagctgggtccccattcacatggtgggttggcagg
gccaatgagaggcattattactggggtggttcaggaccagggatccagaagtgtgcctgt
ggaatcgaaaggaactgcaccgaccccaagtactactgcaactgtgacgctgaccaaacg
cggtggagagaggacgctggtctcctggtgtataaagaccatctgcctgtgagtcaggtg
gtagttggtgacactaaccgtgctggctctgaggctaagctgactgtgggtccactgcgt
tgtcaaggagatggtaactactggaacgcagcatccttcaacacgcctgcatcatacctg
cacttccctaccttccaaggggagaccagtgcagacatctctttctatttcaagacttcc
tcctcttatggcgtctttctggagaaccttggcaatactgacttcatccgcctggagcta
aaagctgccacggtggtgtccttttcctttgatgtgggcaacggtctggtggagctgagt
gtgaggtcatccactcctcttaatgatgaccagtggcacagggtggtggctgagcgcaac
gtgaaggaggctgtgctgcagctggatgggcagttcaaggaggttcgccctgcaccccca
cagggtcacactcgcctggagctttacagccaactctacgtcggtgcatcgggtggccag
agaggcttcctaggatgtatccgtgccctgaagatgaacggtgtgacccttgacctggag
gagagggcgaaggtcaccccgggggtgaagcctggctgctctggccactgcaccagctat
gggcagcactgcagaaacggtggccagtgcatggagaaatacaacggttactcatgcgac
tgcaccttgacggcgtatgacgggcccttctgcactgaagacgtgggtggctacttcgag
agtggaacactagttcgttacgacttccttcccgaggggggccttccagccatcagggat
gtgaagagcctgtctcccctgctgcccacggagggcaaccttacacaggaggagctggtg
ttcagcttcagcacctccaacacccccagcatcctggtctacatcagctccaggacccag
gactacctggctgtggtgctcagacacaatggaacacttcagatccgctacagcctggga
ggcctgagggagccgttcaccatcgacctggaccagcgcaacatggccaacgggcagccc
caccacatcaacatctccaggcaggagaggaacatacggctgcagttggaccattacccc
ccagtcagctacactctgcctgctggctctgacaccaagttcaacctggttaaaactata
ttcctgggcaaagtctttgaaactggccagattgacccagtcctcatagagaagtacaac
accccagggttcgttggctgtctgtccagagttcagttcaacaacatcgcccctctgaag
gcagcactgaggtctggcatcgtcgccccagtgaccacccagggcattctagtggagtcc
aactgcggggcgtctcctctcaccatctcacccatggctgctgccaatgacccctggcac
ctggactcagctggtgctgtattcccattcaacgaggaaagagttagccgggatggagtt
gatcggaacgctgcaattatcggaggtatcattgctgtggtcatcttcaccatcctctgc
accctggtgttcctgattcgccatatgttccgtcacaagggctcctaccacaccaatgag
gccaaaggggcggagtctgcggactgtgccgatgcagccatcattgtcaatgacccagcc
ttcacagaaaccattgatgagagcaagaaggaatggttcatttaa
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