Oncorhynchus kisutch (coho salmon): 109872234 Help Entry 109872234         CDS       T09179                                  Name (RefSeq) roquin-1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism oki  Oncorhynchus kisutch (coho salmon) Brite KEGG Orthology (KO) [BR:oki00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:oki03000]     109872234    04121 Ubiquitin system [BR:oki04121]     109872234 Transcription factors [BR:oki03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     109872234 Ubiquitin system [BR:oki04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     109872234 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK zf_CCCH_4 Prok-RING_4 FYVE NS3_helicase_C Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6 Motif Other DBs NCBI-GeneID:  109872234 NCBI-ProteinID:  XP_020318988 Ensembl:  ENSOKIG00005050375 LinkDB All DBs Position LG27:complement(30268055..30295213) Genome browser AA seq 1105 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IEQLPVNTALLQLVGGQVPKVQPVALITSPEDSQHYEEARQCVEELALYLKPLSNNRGVG LSSTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGLALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNQLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSSSLLLDDCLPLDMGVTRNTS PLTNGSAGHSMPQLITRGTDAVTYDLLCKPKMDGGSSSSPGSPPDSLDSGPKQGFLQPPL AMGHPRGSGDPMPKQMPRGPQMYPQQLPDMYYSDSRPLPSASQYEPSQYPQGYPYQQPPQ YSTQRYIRNLPTPSEPAGLPYQDPYPGYGPPERPYPAPHSGTPYSYLPHYDTRGRHGPYP GPLPYPSQRDDMVRMSPAPLDMPPNHHYQQEQAARERYPPEGYYPTGAQPQSMRSNVREQ YRRSSQPSLDYLHHRRKELMAQLEERKVISPPPFAASPTLPHAFPSDYPPEYGEESSKAF GKCREPDYAGQYSPWSCDTIGSYIVTKDAKPKDIMTPGAMEMMNVDGKGLRGEPSMEAQA RRGAEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMASAQGPKHMAVEFSYG HHGGWGGASYPSHQTGSSSQGHFSEKLSMPAQDREHLKIELQQVNQQITQQTQTHGMERE VSALAAQPSQPCQNQGQQGKWPGPVGVSSNAALVSSEQLSMELHQVEREIGKRTCRIDMD SQVAHEVQYKLKAAQNGQQDHKTQLEEIALALGEVSNGSSGLGQDGGVGGAMLSLTNKAS SLSLCSEPGPGVSELQKNGMVHSCS NT seq 3318 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagccccacaatggacggagttcctgctgtgtcccatctgcacgcagacg ttcgaggagacggtgcggcggcccatctcgctgggctgtggccacaccgtctgcaagatg tgcctgaataagctccaccgcaaggcctgccccttcgaccagacagccatcgccaccgac atcgagcagctgccggtaaacacagccctactgcagcttgtggggggacaggttcccaag gttcagccggtggccctgatcaccagcccagaggactcgcagcactatgaggaggctagg cagtgtgtagaggagctggccctctacctcaaacccctcagcaacaacagaggggtgggt ctaagcagcacagcccagagcatgctgagtcggcccatgcagaggaagctggtgaccctg gtccactgtcagctggtggaggaggaaggccgtgtacgggccatgagggcagccaggtct ctgggggagcgcacggtcacagagctcatcctacaacaccagaacccccagcaattgtca tccaatttgtgggccgccgtccgggcccggggatgccagttcttgggcccagccatgcag gaggaggctctgaagctggtgctgctggctctggaggatggcttggccctgtccaggaag gttctggtgctgtttgtggtccagaggttagagccacgcttcccccaggcctccaagacc agcataggccacgtggtgcagctcctctacagggcctcctgcttcaaggtgaccaagcgt gacgaggactcgtccctgatgcagctgaaagaggagttcaggacgtatgaggcactgcgg cgcgaacacgactcccagattgtgcagatcgccatggagggtggcctccgcatcgctccc gaccagtggtcctccctgctctatggggaccagtcccacaagtcccacatgcagtccatc atcgacaagttgcaaactccagcatcgtttgcccagagcgttcaggagctgaccatcgcc ttgcagaggacgggtgaccccgccaaccttaatcagctccgaccacatctggaactactg gccaacatcgaccctagccccgatgccccccctcccacgtgggagcagctggagaagggt ctggtggcggtgaagacggtggtccacggcctggtggacttcatccagaaccacagcaag aagggagccgacccacaacagcctccccagcacagtaaatacaagacgtacatgtgtcgg gacatgaagcagaaggggggctgtccccgaggagccagctgtaccttcgcccactctcag gaggagctggagaagtaccgtaagatgaacaagcgtttggcggctcgcctccctggctca tccagcctgctgttggatgactgtctccctctggacatgggggtgacccggaacacctcg ccccttaccaacggctcagctggacactccatgccccagctcatcacccgtggcacggac gccgtgacctacgacctgttgtgcaagcccaagatggacggcgggagcagcagctccccg ggatcgccccctgactctctggattcaggtcccaaacaagggttccttcagcctcccctt gccatgggccaccccagggggtcaggcgaccccatgcccaaacagatgccccgggggcct cagatgtacccccagcagctgcctgacatgtactactccgactcacgcccactgccctcc gcctcccagtacgagccttcgcagtaccctcaaggatacccctaccagcagcccccccag tactccacccagcgctacatccgaaacctccctacccccagcgagcccgctggactcccc taccaggacccctatcccggctatggccctcccgagcgcccttacccagctccccactcc ggcaccccctactcctaccttccccactatgacacccggggccgccacggcccttaccct ggccccctgccatacccctcgcagagggacgacatggtccggatgagccctgctcccctg gacatgccccctaaccaccactaccaacaggagcaggcggccagggagaggtacccccca gaggggtactacccaactggggcccagcctcaatccatgaggtccaacgtcagggagcag tacagacgctcctcccagcccagcctggactacctgcaccatcgccgcaaggagctgatg gcccaactagaagagcgcaaggtcatctccccaccacccttcgctgcctcccccaccctt ccccatgcctttcctagtgactacccccctgagtatggggaggaaagctccaaagccttt gggaagtgcagggagccggactacgccggccagtattctccctggtcctgtgacactatc ggctcctatattgtcaccaaggacgccaagcccaaagacatcatgacgcccggcgccatg gagatgatgaatgtggatggtaaaggtctacggggggagccctccatggaggcccaggcc aggcggggggcggaggtcaaagacgacgaccccatcatccccttcggcccccagcccacc gtgtcgcgcttcggggccatctcacgcacctccaagacaggctaccagacgacaggcccc gtgcaggccatggcctctgcccagggacccaagcacatggccgtggagttctcctatggg caccacggaggctggggcggcgcctcctacccctcccatcagactggctcctcctctcag ggacacttcagtgaaaagctgtctatgccagctcaggacagagagcatctgaagattgag ctccaacaggtcaaccagcagatcacccaacagacccagacccacggcatggagagggag gtcagtgccctggcggcccagccctcccaaccatgtcagaaccagggccagcaggggaag tggcccggtccagtgggggtttccagcaatgctgccttggtgtctagcgagcagctcagc atggagctgcaccaggtggagagggagattggcaagaggacctgccggatagacatggac agtcaggtggctcatgaagtccagtacaaattgaaggctgcacagaatggccagcaggac cacaagacccagctggaggagattgctctggccctcggtgaggtatctaatggctccagc ggtctaggtcaggacggtggtgtgggcggagccatgttgtcactgaccaataaagcgtct tcgctcagcctgtgttctgagccggggcccggggtctcagagctgcagaagaatggtatg gtccattcctgctcctag

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