KEGG   Oncorhynchus kisutch (coho salmon): 109872286
Entry
109872286         CDS       T09179                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109872286 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109872286 (exosc4)
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109872286 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     109872286 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109872286
NCBI-ProteinID: XP_020319059
Ensembl: ENSOKIG00005027091
LinkDB
Position
LG27:16061388..16063147
AA seq 245 aa
MAGLELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG
SRSKTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVLTNLYPRSQ
IDIYVKILQSDGGNYSACVNAATLAVVDAGIPMRDYVCACTAGFVDETPLADLCHAEESG
GGTSLALALLPRGGHIALLQMDARLHQDHLETLMEAAMTACKGVSKVLDEVVRQHLQEVS
ALTGE
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcaggcctggagttattgtcagatcaaggatatcgtcttgatggaagaaaagctgct
gaactgcggaaagtacaagctcgtatgggtgtatttgcccaagctgacgggtccgcgtac
atagaacagggaaataccaaagcgctggcagttgtgtatggtcctcatgaagtgcgaggc
tcccgcagcaagaccctccatgaccgtgctgtcatcaattgccaatacagcatggctacc
ttcagtacagctgagcggaagagaagaccccacggggaccgcaagtccacagagatgagc
cttcacctcaagcagactttcgaggcagcagtgttgactaatctgtacccacgctctcaa
atagacatttatgtcaagatcttgcagtcagatggagggaactacagcgcgtgtgtgaac
gccgctactctggcagtagttgatgcgggcatccccatgcgtgactatgtgtgtgcctgc
actgcaggctttgtggatgagaccccattggcagacctgtgccatgctgaagagagtgga
gggggcacatcactggccctggcattgttgcctcgtggcgggcacattgccctgctacag
atggacgcccgactccaccaggaccacctagagacactgatggaggcggcaatgacggcc
tgtaagggcgtcagcaaagtgttggacgaggtggtgaggcagcatctacaggaggtgtct
gcgctgactggagagtga

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