Oncorhynchus kisutch (coho salmon): 109872286
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Entry
109872286 CDS
T09179
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109872286 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109872286 (exosc4)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109872286 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
109872286 (exosc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109872286
NCBI-ProteinID:
XP_020319059
Ensembl:
ENSOKIG00005027091
LinkDB
All DBs
Position
LG27:16061388..16063147
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG
SRSKTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVLTNLYPRSQ
IDIYVKILQSDGGNYSACVNAATLAVVDAGIPMRDYVCACTAGFVDETPLADLCHAEESG
GGTSLALALLPRGGHIALLQMDARLHQDHLETLMEAAMTACKGVSKVLDEVVRQHLQEVS
ALTGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctggagttattgtcagatcaaggatatcgtcttgatggaagaaaagctgct
gaactgcggaaagtacaagctcgtatgggtgtatttgcccaagctgacgggtccgcgtac
atagaacagggaaataccaaagcgctggcagttgtgtatggtcctcatgaagtgcgaggc
tcccgcagcaagaccctccatgaccgtgctgtcatcaattgccaatacagcatggctacc
ttcagtacagctgagcggaagagaagaccccacggggaccgcaagtccacagagatgagc
cttcacctcaagcagactttcgaggcagcagtgttgactaatctgtacccacgctctcaa
atagacatttatgtcaagatcttgcagtcagatggagggaactacagcgcgtgtgtgaac
gccgctactctggcagtagttgatgcgggcatccccatgcgtgactatgtgtgtgcctgc
actgcaggctttgtggatgagaccccattggcagacctgtgccatgctgaagagagtgga
gggggcacatcactggccctggcattgttgcctcgtggcgggcacattgccctgctacag
atggacgcccgactccaccaggaccacctagagacactgatggaggcggcaatgacggcc
tgtaagggcgtcagcaaagtgttggacgaggtggtgaggcagcatctacaggaggtgtct
gcgctgactggagagtga
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integrated database retrieval system