Oncorhynchus kisutch (coho salmon): 109872292
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Entry
109872292 CDS
T09179
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oki03032
]
109872292 (pif1)
03029 Mitochondrial biogenesis [BR:
oki03029
]
109872292 (pif1)
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109872292 (pif1)
DNA replication proteins [BR:
oki03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109872292 (pif1)
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
109872292 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
UvrD_C_2
AAA_22
DEAD
Herpes_Helicase
Mg_chelatase
RsgA_GTPase
ABC_tran
AAA_7
PhoH
AAA_16
AAA_5
Motif
Other DBs
NCBI-GeneID:
109872292
NCBI-ProteinID:
XP_020319062
Ensembl:
ENSOKIG00005018843
LinkDB
All DBs
Position
LG27:32241703..32252201
Genome browser
AA seq
640 aa
AA seq
DB search
MMQGDDGAQLQCSVVVERLNSSGQATKRQVIRKAAVFLGRNEFQEIILRVHNGKVPESYT
LKEFQLFTRFAKDGKCTVKLLPENVQVLISDCPPHLLNIFLKTLSIKHQAWQTSKPMTDR
EKLKACLPRSFETISPLQQKDVQKANELRSKVNAPVLSKGLVVRTGNKMTGGPQGQQVKR
QRTDCDSSPLKALHPSKKPTLSLPAARKLNKEQATVLSAVLSGKNVFFTGSAGTGKSFLL
KRIVGSLPPKSTYATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWT
SCRHLIIDEISMVEAQFFDKLEAIARCLRRSTEPFGGIHLIVCGDFLQLPPVSKEKDKAA
FCFQSRSWRKCIHLNMELTEVRRQTDQSFISLLQAVRVGRVTEEVTAKLIKSAYHKIERD
GILATRLCTHKDDVELTNDNKLQQLPGSVRVFEAVDSDPALVKTIDSQSPVSRLLQLKVG
AQVMLTKNLDVQRGLVNGARGVVVDFQPGKLGLPRVRFMCGTTEALKPERWMFKAGGGLY
LSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFERGQAYVALSRAKSLEGLRVMDFDP
HVVRADPDVLHFYSKLRKERLLLQASMNEFVGKSNKANRW
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggggacgacggtgcccagctccagtgcagtgtcgtggtggagcgcctgaac
tcctctggccaggccaccaaacgccaagtcatccggaaggcagctgtatttctcggtcgc
aacgagttccaggagataatcctgcgcgtgcacaacggcaaagtgcccgaaagttacacg
ctcaaagagttccagcttttcacccggtttgctaaggatggcaagtgcaccgttaaactg
ctccccgaaaacgtccaagtgctcatctctgactgcccgccccacctactaaacattttc
ctgaagaccttgagtatcaaacaccaggcctggcagactagcaaacctatgacagaccga
gagaagctgaaagcctgtctgccccgcagcttcgagaccatcagcccattacagcagaag
gatgtacagaaggccaatgagctgaggagcaaagtgaatgcaccagtgctctctaaaggt
ctggtagtgaggactggtaataagatgactggaggaccacagggacagcaggttaagaga
caaaggacggactgtgactctagcccattgaaggcactccacccaagcaaaaagcccacc
ctgtctctaccggcggcacggaagttgaacaaagaacaagccactgtcctcagtgctgtg
ttgagtgggaagaatgttttcttcactggcagtgcaggcacagggaagtccttcctgttg
aagaggattgtgggctctctgccgcccaagagcacctacgccacggccagcacgggcgtg
gcagcgtgtcacatcggggggaccacgctacacaactttgctggtatcgggtcaggctca
gcccctctggagcagtgtatagagctggcccagagacccggggtcctgcagcactggact
agctgtcgccacctcatcatcgacgagatctccatggttgaggcccagtttttcgacaag
ctggaggccatagccaggtgtctgaggaggtccacagagccgtttggaggaatccatctg
atagtgtgtggggacttcctccagctgcccccggtctccaaggaaaaggacaaggccgca
ttctgcttccagtctagaagctggcggaagtgcatccatctgaacatggagctgactgag
gtgcgcagacagactgaccagtctttcatctccctcctgcaggcagtgagggtgggcaga
gtcacagaggaagtcactgccaagttgataaagagtgcctatcacaagatcgagcgggat
ggtatcctggcaaccaggctttgcactcacaaggacgatgtagagctcactaacgacaac
aagctccagcagctgccagggtcagtgcgggtgtttgaggctgtggacagcgaccctgca
ctggtgaagaccatagacagccagagtcccgtcagcaggctgctgcagcttaaagtgggc
gctcaggtcatgctaacaaagaacctggatgtccagcgtggcctggtcaacggggctcga
ggtgtcgtggtggactttcagccggggaaactagggctcccacgtgtgcgtttcatgtgc
ggcaccactgaggcgttgaagccagagcgttggatgttcaaggccggaggcgggctttat
ctgagccgccagcagctgccactcaaactggcctgggccatctctatccacaagagccag
ggcatgacgctggactgtgtggagatctccctggcgcgtgtttttgagaggggccaggcc
tatgtggcgctgtctcgggccaagagcctggaggggctaagggtcatggactttgacccc
cacgtggtccgtgccgaccccgacgtgctgcacttctacagcaagctgaggaaagagagg
ctactgttgcaggcttcaatgaatgagtttgtgggcaaaagtaacaaggcgaatcgttgg
tga
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