Oncorhynchus kisutch (coho salmon): 109872322 Help Entry 109872322         CDS       T09179                                  Name (RefSeq) protein patched homolog 1   KO K11101   patched 2 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:oki00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     109872322 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sterol-sensing Patched Motif Other DBs NCBI-GeneID:  109872322 NCBI-ProteinID:  XP_031663002 Ensembl:  ENSOKIG00005026763 UniProt:  A0A8C7I4M0 LinkDB All DBs Position LG27:complement(22878095..22914252) Genome browser AA seq 1458 aa AA seqDB search MASDPRVPGAGVFGDLPPNYMRSPPPVNSDLLRRPSYCHAAFALKQISKGKAVGQKAPLW VRARFQALLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETDIEQLWVEAGSRVSR ELRYTKEKQGEESVFTSQMLIQTPKQEGTNILTQGALLLHLEAALSASKVQVSLFGKSWD LNKICYKSGVPIIENVMIERMIDKLFPCMIVTPLDCFWEGAKLQGGSAYLPGMPDIQWMN LDPLKLMEELSQFTSLEGFREMLDKAQVGHAYMNRPCLDPNDAECPLSAPNKDLRESPDI AGRLQGGCHGFSKKFMHWQEELILGGRVKDTQNALQSAEALQTMFLLMSPKQLYEHFKDD YEIHDINWNEDKATAILESWQRKFVEVAHGSIPQNSTSEIHAFSTTTLNDIMKSFSDVSV IRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAVT TQVLPFLALGIGVDDMFLLAHSFTETGINIPFKERTGDCLRRTGTSVALTSINNMIAFFM AALVPIPALRAFSLQAAIIVVFNFAMVLLIFPAILSLDLHRREDKRLDILCCFYSPCSSR VIQIQPQEFSDANDNTTTHSHAPGAQTTTTYTGSTIITSTQITTTVQAFTQCDAAGQHIV TILPPTSQISTSPPSVLVATSPVPPSPTDSYGSQLFTPSSSTRDLLAQMDESKEARECVP LPFFRWNLSSFAREKYAPLLLKPESKVVVVVLFVALLGLSLYGTTMVHDGLYLTDIVPRD TKEYDFINAQFKYFSFYNMYLVTMDGFDYARSQRLLIQLHNSFTSVKYVVKDSDQQLPRM WLHYFQDWLRGLQAAFDTDWEAGRITWDNYHNGTEDGVLAYKLLIQTGSKKDPFNYNQLT SRRLMNEEGLIHPEVFYIYLTVWVSNDPLGYAASQGNFYPQPREWIHDKYDTTGENLRIP AAEPLEFAQFPFYLNGLRQASDFIESIESVRAICEEFTRKGVLNYPNGYPFLFWEQYIGL RHWFLLAVSVVLACTFLVCAILLLNPWTAGIIVFILAMMTVELFGIMGLIGIKLSAIPVV ILIASVGIGVEFTVHIALAFLTAIGNRNRRSAVALEHMFAPVIDGAISTLLGVLMLAGSE FDFILRYFFAVLAILTVLGILNGLVLLPVLLSLMGPPPEVTPADNGSRLPTPSPEPLPPP MTHHGYYGGHGPQGPRQQAFSESSDSEYYSETTTTSGIGEEYKYCDRSPYITSPTSHILL EDSKNPSFPKLTVVKPFKEDPTVTAQKDLLNESSLNAVTSVSSQLTQWDNKHDYKSDQGP RRQHLPSDRTQGPERTNHCGPRSQTNRGPHQNRTKMPAYNGGTVPSSAVTTMVTATASVT VAVHPSLPGAYHGYMHEGYVDSESDCFEDTKRTSQSCGKATQSSKRESLEVEDLESVQNQ HQVNQAQVGPRIQAAKDY NT seq 4377 nt NT seq  +upstreamnt  +downstreamnt atggcctcggatcccagagtcccaggggccggtgtttttggagatttacccccaaattat atgcgttctccgccgccagtaaactcagatcttctccggagacccagctactgccacgct gctttcgcattaaaacagatttctaaggggaaggctgtgggtcagaaggccccgttgtgg gttcgggcgaggttccaggctcttctgttttctttgggctgtcacatccagcgacattgt ggaaaagtccttttcattggactgcttgtgttcggtgccttgtctgtgggtttgcgggtt gctgccattgagacggacattgagcaactgtgggttgaagccggtagccgagtgagtcgg gagctgcgctacaccaaggagaaacagggagaggagtctgtgttcacatcacagatgctc atacaaacccccaaacaggaagggaccaacattctgacccagggtgctttgctgcttcac ctggaggcagcgctctcggccagcaaggtccaggtgtctctgtttggaaaatcatgggat ctcaataaaatctgctacaaatctggtgtccctatcatagaaaatgtcatgattgaaaga atgattgacaagctgttcccctgtatgattgttaccccactggactgtttctgggaaggt gcaaagctacagggggggtcagcatacttaccggggatgcctgacatccagtggatgaac ctggaccctctgaagctgatggaggagctcagccagttcacaagtctggagggcttcagg gaaatgctggacaaggcccaggtgggtcacgcttacatgaaccgcccctgcctggacccc aacgacgccgagtgccccctcagcgcccccaacaaggacctgagagaaagtcctgacatt gccgggcggctccaaggcggttgccacggcttctccaaaaagttcatgcactggcaggag gagcttatcctgggcggccgggtcaaggacacccagaatgctttgcagagtgcggaggcc ctccagaccatgtttctcctgatgagccccaagcagctctacgagcactttaaggacgac tatgagatccatgacatcaactggaacgaggacaaggccaccgccatcctggagtcctgg caaaggaagtttgtagaggtggctcatggcagtatcccccagaactccacttcagagatc cacgccttctccaccaccaccctcaatgacatcatgaagtccttctcggatgtcagtgtc atccgggtggctggaggctacctgctcatgctggcctacgcctgtgtgaccatgctccgt tgggactgtgccaagtcccaaggggccgtggggctggctggtgtgctcctggtggctcta tctgtggcagctggcctggggctgtgctctctgctgggcctgtcctttaacgctgtcacc acacaggttctccccttcctggctctggggatcggtgtggatgacatgttccttctggcc cactccttcactgagactggcatcaacatcccctttaaggagaggacgggggactgcctg aggaggactggcaccagcgtggcactcacctccatcaacaacatgatcgccttcttcatg gcagccctggtccccatcccagcactgcgtgccttctctctgcaggcggccattattgtg gtgttcaacttcgccatggtgctcctcatcttcccggccattctgagtttggacctgcac cgtcgggaggacaagcgtctggacatcctgtgttgtttctacagcccctgctcctcccgg gtcatccagatccaaccccaggagttctccgatgccaacgacaacaccaccacccacagc cacgcgcctggcgcccagactacaacgacctacacaggctccactatcattaccagcacc cagatcaccaccaccgtccaggccttcacccagtgtgacgcggcaggccagcacatagtc accatcctgccccccacctcccagatctccaccagccctccctctgtgttggtggccacc tcccctgttcccccctcccccaccgactcctacggctcccagctcttcaccccctccagc tccacgcgggacctcctggcccagatggacgagtccaaggaggccagggagtgtgttcct ctccccttcttccgctggaacctgtcaagcttcgcccgggagaagtacgctcctctcctc ctaaagccagagagcaaggtggtggtcgtggtcctctttgtggctctgctggggctcagc ttgtacggaaccaccatggttcatgacggactctacctgaccgacattgtgccccgcgac accaaggagtacgacttcatcaacgcccagttcaagtacttctctttctacaacatgtac ctggtgaccatggacggctttgactacgcccgctcccagcgtctcctcatccagctgcac aactctttcacctcggtcaagtatgtggtgaaggacagcgaccagcagctgccccggatg tggctgcactatttccaagactggctcagaggactgcaggctgcctttgatacagactgg gaggcaggcagaatcacctgggataactaccataacggcaccgaggatggtgttctggcc tacaagctgctcatccagaccggctccaagaaggaccccttcaactacaaccagctgact tctcgtcgtctgatgaatgaggagggtctgattcacccagaggtcttctatatctacctg actgtgtgggtgagcaatgaccctctgggctatgctgcctctcagggtaacttctaccct cagcctcgcgagtggatccacgacaagtatgacaccaccggagagaatctgcgcatccct gccgcggagcccctggagtttgctcagttccctttctatctgaacggcctgaggcaggcg tccgacttcatcgagagcatcgagagcgtgcgcgccatctgcgaggagttcacccgtaaa ggtgttctcaactaccccaatggttacccattcctgttctgggagcagtacatcggcttg cgacactggttcctcctggctgtcagcgtggtgctagcctgcaccttcctggtctgtgcc atcctcctgctcaacccctggaccgctggcatcattgtcttcatcctggccatgatgacg gtggagctgtttggtatcatgggcctgatcggcatcaagctcagtgccatcccagtggtc atcctcatcgcctctgtgggcatcggcgtcgagttcactgtccatatcgcactggccttt ctgacggccataggcaataggaacaggcgttctgcggtggccctggagcacatgtttgcc cctgtgattgacggggccatctctacactgttaggggtcctcatgctggctggctccgag tttgacttcattctgaggtacttctttgcggtgctggctattctgaccgtgctggggatc ctgaatggactggtgctgctgcccgtgctgctctccctcatgggcccacccccggaggtc actccggccgacaacggcagccgcctgcccaccccatcgccggagcccctcccccctccc atgacccaccacggctactacggaggacacggtccacagggcccacgacaacaggccttc tcagagtcgtcggactctgagtactactcggaaacgactaccacatcaggaattggggag gagtataagtactgtgaccgcagtccttacatcacctctcctacctctcatatactactg gaggacagcaagaaccccagcttccccaaactcacggtggtgaaaccgttcaaagaggac ccgaccgtaaccgctcagaaagatctcttaaatgagtcttctctgaatgcggtgacttcg gtcagctctcaactcacgcagtgggataacaaacatgattacaaatctgaccagggaccc aggaggcaacatttacccagtgacaggacccagggtcctgagaggactaatcactgtggt cccaggtctcagaccaacagagggcctcatcagaacaggactaagatgccggcctataat ggcggtaccgtgcccagtagtgctgttactactatggttacggccacagcctctgtgact gtggctgtgcaccccagcttgccgggggcctaccatgggtacatgcacgagggctacgtg gacagtgaatcagactgttttgaggacactaagaggacttcacaatcttgtgggaaagct acccaatcttccaagcgtgaatccttggaggttgaagacctggaatctgtgcagaaccag catcaggtgaaccaggcacaagttggcccacggatccaggcagccaaagattactag

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