Oncorhynchus kisutch (coho salmon): 109872344
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Entry
109872344 CDS
T09179
Symbol
astn1
Name
(RefSeq) astrotactin-1 isoform X8
KO
K24479
astrotactin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109872344 (astn1)
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
109872344 (astn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
TM_ErbB1
fn3
NDNF
Motif
Other DBs
NCBI-GeneID:
109872344
NCBI-ProteinID:
XP_020319133
Ensembl:
ENSOKIG00005030198
LinkDB
All DBs
Position
LG27:complement(23476783..23722580)
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AA seq
1302 aa
AA seq
DB search
MRGMMGLRLLVSLAWILAFKAANIQGVNADEDQSQDMECKMKSVTVSALPFLRENDLSIM
HSPSASEPKLLFSVRNDFPGEIVVVDDLENTELPFFVLEITGNSEDIPLVRWRQQWLENG
TLLFHIHHQDGSQNLPGLSATDDPASDSAEEELRILHVSVMGGMIALLLSILCLVLILYT
RRRWCKRRRVPQPQKSASAEAANEIHYIPSVLMGGQARESLRNSRGQGHNSSGTLSIRET
PILDGYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNDKASMDLTPGSDNTKLS
LMSKYKDNIIATSPIGSNHLQQNTLLLHNTSSTGQRKQRLSSKTRVGSTFLNPDGDSGTE
ADSEPQLTFYTDPNRSRRRSRAGSPRSPINKTTLTLISVVSCVIGLVYSSHLSCGLNVRV
ILHVPEHLIADGSRFILLQGSQLDASDWLNPAQVLLYYQQNASGPWINELCGRRILDPCE
HQCDPETGDCLCLDGYMKDPVHKHLCIRNEWGPNQGPWPYTIFQRGFDLVMGEQPSDRIF
RFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVDVREELMISSSFDSLE
VLLDSFGPVRDCSKDNGGCSRNFRCVSDRKLDSSGCMCPPGLSPMKDGTGCYDHHIGIDC
SDGFNGGCEQLCLQQLAPLEDDPTLYNIQMFCGCIEDYKKGQDGRSCQPLSEACTEGLDC
GETADIPANQTVFGDLFYGYNNHTKEITSGQILKATFRQKNFARGIEQQLPDGMVVASVP
TEVQCHEELSDPVPDPDYLTGMVNYSEVSGYPLIQQWRLRSILYHVKLNQWVLSQAFSSA
IHSLDGATLRSDFVSILREFGNHFVQEAVYGFEEACTIWYPNKQVQRQLWLEYQDISKGN
SPSEESEERDKEPRTLTYPAYIASLLDSGAKRMAVGVRMDCSSQGQCPYSCHLCHMSPGP
GRPAEPVLLQMTKATPLYELVSNNETYQALQEAMMSMLWCSGKGDVIDDWCRCDSNAFGM
DGLPTCAPLPQPRLRLSHSYEPSSSLVIMEWNHTEPLIGVRIVDYLISQEKVTERTDHSK
VETESMLSFVDDILSGAKSPCVMLGDIPDLLTSSVSMIIRCLEPDTTYMFRLWAVDNTGR
RSSPSEVTIKTPCPAVDDVKAQEISDKIYNLFNGYTSGKEQQTAYNALMELGSPTLHRVL
YHYNQRYESFGEFTWRCEDELGPRKAGLILSQLDNLSGWCRGLLQESKIGLRRMSLKYLS
CRYTDTKAFGLNWVELGQDVRKACDEQNLLVMYNDYGEPKER
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcatgatgggtctgagattgcttgtctcactcgcatggattcttgccttcaaa
gctgctaatattcaaggtgtgaatgccgacgaggatcagtcccaagatatggaatgcaaa
atgaaaagcgtcaccgtgtctgcgttgccgtttttgagagaaaacgacctgagcatcatg
catagtccgtcggcctccgagcccaagcttctgttctccgtcagaaatgatttcccggga
gaaatagtcgtcgtggacgatctagaaaacactgaactcccctttttcgtcctagagatc
acgggaaactctgaggatattcctctggtgcgatggcggcaacagtggctggagaacggc
acgttgctctttcatatccaccaccaagatggcagccagaacctccccggcctctccgcc
acggacgaccctgccagcgactctgccgaggaggagctacgcatcctccacgtctctgtc
atgggaggcatgatcgctttgctcctctccatcctctgcctggtcctcatcctctacaca
cgcaggcggtggtgcaaacgccgccgtgtgccccagccccagaagagcgccagtgcagag
gcggccaatgagatccactacatcccttcggtattgatggggggccaggccagggagagc
ctgagaaactccaggggccagggccacaattccagcggcacgctcagtatccgagagact
cccatcctggatggctacgagtatgacatcactgacctgagacaccacctgcagagagag
tgcatgaacggaggagaggactttgccagccaggtcacacgcaccctggactcccttcag
ggctgcaatgacaaggccagcatggacctgacacctgggagtgacaatacaaagttgtcc
ctaatgagcaagtacaaggacaacatcatcgccaccagccccatcggcagcaatcacctg
cagcagaacactctcctcctccacaacacctcctccactggccaacgaaaacaacgtctg
tccagcaaaactcgtgtgggttcaaccttcttgaacccagacggggactctggcacggag
gccgacagcgaacctcagctgaccttttacactgaccccaatcgcagcaggcgccgcagc
cgagcaggttccccacgaagccccatcaataagaccaccctgactttgatcagcgttgtc
agctgtgtgatcggcctggtgtactcctcacacctctcctgtggcctcaatgtcagggtc
atcctccatgtgcccgagcacctcatcgcagacgggtccaggttcattttgctgcagggc
agtcaactggatgcgtctgactggctgaacccggcccaggtgttactatactaccagcag
aatgccagcgggccttggatcaatgagctgtgtggccgccgcattctggacccctgtgaa
caccagtgtgatccagagacaggtgactgtctctgcttagatggttacatgaaggacccg
gtccacaagcatctctgtattcgtaacgagtggggtccaaatcaaggaccctggccttac
actattttccagcgtggttttgatctggtgatgggagaacaaccatctgatcgcattttc
aggttcacatacacattgggggaagggatgtggttaccattaagtaaaagctttgtcatt
ccacctgctgagctggcaatcaacccttcagcaaagtgcaagactgatatgactgtcatg
gaggatgctgtggatgtgagagaagagctgatgatctcctcatcgtttgacagtctggag
gttttgctggactcgtttggcccggtgcgcgactgctcaaaggacaacggtggttgtagc
cgaaacttccgctgcgtctctgaccgcaagcttgattccagtggatgcatgtgccctcct
ggactgagtcccatgaaggatggcacaggctgctacgaccaccacattggcatcgactgc
tctgacggctttaacggaggctgtgaacaactgtgcctccagcaactcgcccccctggag
gatgaccccaccctttacaacatccagatgttctgcggttgtattgaggattacaagaaa
ggtcaagatggtcgttcctgccagcccctgtctgaagcctgtaccgagggactggactgt
ggggagacagctgacatcccagccaaccaaactgtttttggggatctcttctatggctac
aacaaccacaccaaggagatcacctctgggcagatcctcaaagctaccttcaggcagaag
aactttgcccgaggcatcgagcagcagctcccagatggcatggttgtggcatcagttcca
accgaggtgcaatgccacgaagagctgtcagacccagtccctgacccagactatctcaca
ggaatggtgaactacagtgaggtctctgggtacccactcatccagcaatggcggctgagg
tccatcctgtaccacgtcaaactgaaccagtgggtactctctcaagcgttcagctctgct
atccactccctggacggtgccaccctccgcagtgattttgtctccatcctcagggagttt
ggtaatcactttgtacaagaggcagtgtacggcttcgaggaggcctgcactatctggtac
cccaacaagcaggtccagaggcagctgtggctggagtaccaggacatcagcaaagggaat
tccccatcagaagagtcagaggagcgtgacaaggagccccggaccctgacctacccagcg
tacatcgccagcctgctggactccggtgccaagcgcatggcggtgggggtgcgcatggac
tgcagcagccaaggccagtgcccgtactcctgccacctctgccatatgagccctgggcct
gggcgtccagctgagcctgtactgctccagatgactaaggccaccccgctctacgagctg
gtctccaacaatgagacctaccaggcactgcaggaggccatgatgagcatgctgtggtgt
tctgggaaaggtgacgtcatcgatgactggtgccgttgcgactcgaacgcattcgggatg
gacggcctgccaacatgtgcacctctcccccagcctaggctcaggttgtcccactcctat
gagcccagcagttcattggtcatcatggaatggaatcacactgagccactaattggggtg
cggattgttgattacctcatcagccaggagaaggtgacagagaggacagaccactccaaa
gtggagacagagtcgatgttgagctttgtggatgacatcctgtctggggccaagtctccg
tgtgtgatgcttggggatatccctgacctcttgacctcctccgtgagcatgatcatccgc
tgcctggagccagacacgacgtacatgtttaggctctgggcagtggacaacacaggccgt
cgctccagtcctagtgaggtcaccatcaagaccccctgtcctgctgtggatgacgtcaaa
gcacaagagatttcagacaagatctacaacttgttcaatggttacacaagtggcaaggag
cagcagacggcctacaatgcgctgatggaactgggctctcccaccctgcaccgtgtgctc
taccactacaaccagcgttacgagagcttcggagagttcacctggagatgcgaggatgaa
ctggggcccaggaaagctggtctgattctctcccagctggacaacctgagtggctggtgc
aggggtcttctccaggagtccaagatcggcctgcgcaggatgtccctcaagtacctgtcc
tgccgttacacagacaccaaggcctttggtctcaactgggtggaactgggccaggatgtg
cgaaaggcctgcgacgaacagaacctgctagtcatgtacaatgattatggggagcccaaa
gagcgttga
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