Oncorhynchus kisutch (coho salmon): 109872435
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Entry
109872435 CDS
T09179
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109872435
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109872435
Surveillance factors
Other surveillance factors
109872435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
MRP-S32
Motif
Other DBs
NCBI-GeneID:
109872435
NCBI-ProteinID:
XP_031663517
Ensembl:
ENSOKIG00005032422
LinkDB
All DBs
Position
LG28:complement(10264608..10284960)
Genome browser
AA seq
1063 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGGSVTSPPPSPAMPKSKLADYRYGRE
EMLALYIKDNKPPEDMQDKEFAAIMQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLMG
KGGGAAPVGVSRGRGGCIRGGRGRGRGEGAFYQRVPGGPDEGEVGFGRGREMLRSQSWDD
RAERPRFEKPIRCAEVVRPGFEEAGPPGRKDSWRADSDNWRTLREEEEEAAAAGGEQPAW
RVAGSRRDDGGPRSAGWRDRGGRRKFEFEFRDGEGPRRESDRDGLPEWCTDEEDGEMGTF
DSSGAFMCIKQKDCKDTITEEDLEFEALEEEEENDQGGKDNNADREDLLSFYSFRLDECE
AAGEGEDEYKTPSPPAISGSPPSDPLPAPCATQAPISHPTKTNYVPAEGCPLPGSGAQLS
PDPPSTTTSSLIPPPSGSLLPSTGGEAEEDEGMKHLQQEAEKMVASLQDTSLEEECFTQA
LQESHTITSHSHTHPAPHSHTHAAGHTHSTHRDCALPLSHEAAMKWFYKDPQGEVQGPFS
TVEMCEWFQAGYFTMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLGNMDQELL
KKHLEQAATAALYQQLQMRFQHMNRYTHTHTHTHTHTHNLCECTNVCICRSGDSSMMPSM
NRSMSVPDNGSMWDMHTSASQQSGGEANLWDLTMSHSTQGPSLEQLQKLQDRREAELRAK
REEEERKRQVEKRRQQEEQKRRDEEELYRRKQQCRQQQELIMKLLQQAQPGAPGCVSGSG
WSGSQASALSKQGKSLGLLELETERLLKQQAQHQRAQHQRDRHGGLSMGQWGEGSVGMWS
GGGMEPKGSSGGMGVWEEAVKNQNSLRNMGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKL
LQGMKPQDGFTTWCEQMLHALNTSANNSSSSLDVATIVAYLKEVESPYEVHDFIRSYLGD
TMEAKEFAKQFLERRAKQKANHQRQQQQQQQLSKEVSGLSNFPIQSMFQAAQMGKGGMYD
SQAAKMKKKQTMMLHSDPSILGYSFLSAGDRMNLGEMETVEDY
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacctaaacttgaggctccgtgcactatccagaggggggagtgtgacgtcc
ccccctccttctccagccatgccaaagtccaagctggctgattaccgctatggccgcgag
gagatgctagcactttatataaaagataacaagcccccagaggacatgcaggataaggag
tttgctgctatcatgcaggatgagcctgtgcagcctttggccctggagcctctaactgag
gaggagcagagaaacttctccatgtctgtgaacagtgtggctgtgctgaggctgatggga
aagggaggcggggctgcccctgtaggcgtgtctaggggccgtggaggatgcatcagagga
ggtagagggagagggagaggtgaaggtgcgttctaccaaagagttcctggaggtcctgat
gaaggagaggtgggcttcggtcgtggccgggaaatgctccgcagccaaagctgggatgac
cgagctgagaggccaaggtttgagaagccaatcaggtgtgctgaagtagtgcgtccaggg
ttcgaagaggcggggcctccgggtaggaaggactcctggcgtgctgacagcgacaactgg
cgtaccctccgagaggaggaggaagaggcagcagcagcaggaggagagcagccggcttgg
agagttgcaggatcccgccgggatgatggaggtcctcgttctgcaggctggcgtgatcgt
ggcggccggaggaagtttgagtttgaattccgtgacggcgagggcccccgcagggaatcc
gacagggacggccttcctgagtggtgcaccgacgaggaggatggagagatgggaaccttt
gactcctctggggccttcatgtgcatcaagcagaaagactgtaaggacaccatcactgaa
gaggatctggagtttgaagctctggaggaagaggaggagaatgatcagggaggcaaggac
aacaacgctgacagagaagacctcttgtccttctactcctttcgtctagatgaatgtgaa
gcagcaggtgagggagaagatgagtacaagactccttctcctcctgccatctctggctct
ccaccctcagaccctcttcctgctccctgtgccacacaggcacccatctcccatcccacc
aaaacaaactatgtgcccgctgaaggctgcccacttccagggagtggtgcccagctcagc
ccagaccccccctccaccaccacttccagcctgattcctcctccctccggatctctcctc
ccctcaacagggggagaagcagaggaggacgagggcatgaagcacctgcaacaggaggct
gaaaagatggtggcctcactgcaggacacgtcccttgaggaggagtgtttcactcaagca
ctacaggagagccacacaatcacctctcactctcacacacacccagccccacactctcac
acacacgccgctggacacacacactcgacccatagggactgtgccctgcccctctcccac
gaggcagccatgaagtggttctacaaggatccccagggagaggtccaaggtcctttctcc
acggtggagatgtgtgagtggttccaggccggctacttcaccatgaccctgctggtaaag
aggggttgtgatgagggcttccaacccctgggtgacgtcatcaaaatgtggggccgtgtg
cccttctcccccggcccctcccccccgcccctcctgggcaatatggaccaggagctgctt
aagaaacatttggagcaggcagccactgcagctctataccagcaactacagatgcggttc
cagcacatgaacaggtacacacacacacacacacacacacacacacacacacacaattta
tgtgagtgtactaatgtgtgtatttgcaggagtggagattctagcatgatgccctcgatg
aacaggtccatgtcagtacctgataatgggtccatgtgggacatgcatacctcggcctcc
cagcagtcaggtggtgaggccaacctatgggacttaaccatgagtcattccactcagggg
ccatctctggagcagctacagaagctccaggaccggcgtgaggctgaactcagggccaag
cgagaggaggaggagcgcaagcggcaggttgagaagaggaggcagcaggaggaacagaag
aggcgtgatgaggaggagctgtacaggcgtaagcagcagtgtcggcagcagcaggagctg
atcatgaagctgctacagcaggcccagcccggggcaccagggtgtgtctctgggtcaggg
tggagcggctcccaggcctcagccctctccaaacaaggcaagagcctcggcctgctggag
ctggagaccgaaaggctgctcaaacagcaggcccagcaccagagggcccagcatcagaga
gacaggcatggaggcttgtctatgggccagtggggtgaggggtctgtgggcatgtggtct
ggtgggggcatggagcccaaaggcagctctggagggatgggtgtctgggaggaggctgtg
aagaaccaaaacagcctccgcaatatgggcatgaagaacagccgcagcagcccatctctc
agtgagcagtacatgctgaggaagaagcgtacagaggaggaggacaagctgctgaaactg
ctgcagggcatgaagccccaggatggcttcaccacctggtgtgaacagatgctacacgca
ctcaacacctccgctaacaactcctcctcctcactggacgtggcaaccatcgtggcctac
ctgaaggaggtggagtctccctacgaggtccatgactttatccgctcctacctgggcgac
accatggaagccaaagagttcgccaagcagttcctggagcgccgagccaaacagaaagcc
aaccaccagagacaacaacagcagcaacaacagctatcaaaggaagtttcagggctgtcc
aactttcctatccagtccatgttccaggcagcccagatgggaaagggaggaatgtatgac
agtcaggctgcaaagatgaagaagaaacagaccatgatgcttcactctgaccctagcatc
ttaggatattcattcctgagcgctggggacaggatgaacctgggtgagatggaaacagtg
gaggattattga
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