Oncorhynchus kisutch (coho salmon): 109872473
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Entry
109872473 CDS
T09179
Name
(RefSeq) junctional adhesion molecule A
KO
K06089
junctional adhesion molecule 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecule (CAM) interaction
oki04517
IgSF CAM signaling
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109872473
04517 IgSF CAM signaling
109872473
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109872473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109872473
04090 CD molecules [BR:
oki04090
]
109872473
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
CTX family
109872473
CD molecules [BR:
oki04090
]
Proteins
109872473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
Ig_C17orf99
V-set_CD47
DUF4307
C2-set_2
Motif
Other DBs
NCBI-GeneID:
109872473
NCBI-ProteinID:
XP_020319310
Ensembl:
ENSOKIG00005044460
UniProt:
A0A8C7N488
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Position
LG28:2872111..2904346
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AA seq
296 aa
AA seq
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MFVSGLVSVFLFLHATGIDCAFTVTTSNADVRAKENEGADLYCTHSADFGANARVEWKFK
DMKGSTTHVIFDGKPTTPYADRVTKFDGMLRFSKVTRKDNGEYYCAVSGSQKFGEVKVKL
TVLVPPSMPMCRVPTSVTTARSALLSCHDAQGSPPPTYKWYKDNNPLPEDPSKFAAFRNY
TYKINTVNGNLEFPLASKMDTGDYSCEAVNDAGPAKRCEAVRMEVHDINTGGIVAGVIVA
LLALALLGFGLWYARRKGYLPKKSASQPKPSVVYQPTSEYGDEEDGEFKQKSSFVV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcagcggcttggtatcggtgtttctcttccttcatgcaacaggtatagactgc
gccttcacagtcacaaccagcaatgcagatgtgagggctaaagagaatgaaggtgctgat
ctttactgcactcactctgctgactttggtgcaaatgccagagttgagtggaagtttaag
gacatgaagggttctacaactcatgtcatttttgatgggaaacctaccacaccatatgcc
gaccgtgtcactaagtttgatgggatgctgaggttcagtaaggtgacgcggaaagataat
ggggagtattactgcgcggtgtctggtagtcagaagtttggggaggtcaaagtgaagctc
accgttttagtgcctccatccatgcctatgtgtagggtcccaacctctgtgacaacggcg
cgtagcgcgctgctttcctgccatgatgcccaggggtcacctccccctacctacaagtgg
tacaaagacaataaccctctccctgaggaccccagcaagttcgctgccttcaggaactac
acctacaagatcaacactgtcaatggcaacctggagtttcctttggcttctaagatggat
acaggagactacagctgtgaggctgtgaatgatgccggccctgcgaaacgctgtgaagct
gtcagaatggaagtccatgacatcaacactggaggtattgttgccggggtgatcgtggct
ctcctagccctggccctgctaggctttggactgtggtacgcccgccgcaaaggatacctg
cctaaaaagagtgcaagccaacccaaaccctcagtggtctaccagccaacatcggagtat
ggcgatgaagaggatggggaattcaaacagaagtcttctttcgtggtatag
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