Oncorhynchus kisutch (coho salmon): 109872485
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Entry
109872485 CDS
T09179
Name
(RefSeq) protein transport protein Sec24A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109872485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109872485
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109872485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
109872485
NCBI-ProteinID:
XP_020319325
Ensembl:
ENSOKIG00005035431
LinkDB
All DBs
Position
LG28:complement(37311548..37336268)
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AA seq
1135 aa
AA seq
DB search
MSSTGFNFQNGPGGQPYANGPLQNQVVLQPPGPGYNMAHQPPYNPMQAKGPMPPGPGLYN
SGPCQPIPPVSSYQASPGQPRLNRPPMGPPHPMTPPQSTSPCPGLRMPPAQATPALPVSA
NSYYQHPPAWQYGALPLMGAPPPMGAPPPMATPPLAFVDNHVTSSPNLAPLQAPSAGYSA
APSPVYHNAMQPSGPPLPPTSLHRSTQPGSAPPPMNPVAAPHTYQPGMTAPYGHPPTGPT
PSMRPTPPPMGNATPPLPFGPKTDAQCGSDACDDAAHTEYDNQENDIECPGHIPTPANGA
QVPNSFDHLETSPKMAGPPQQPGPPVRHMGLSYPSLPPGYQNTSASPMQAQTQPYSHAPQ
SYQQPSAGPAQLSPSLAGLSLQSQTPETLRVVNLLQERNLLPPGPITPPTPCLPQDLQKI
NCHPEVFRSTLTNIPQTQSLLNKAKLPLGLLLHPFKDLSQLPVVTSSTIVRCRSCRTYIN
PFVTFLDQRRWKCNLCYRVNDVPEEFMYNPVTRSYGEPHKRPEVQNATIEFIAPSEYMLR
PPQPAVYLFVLDVSHNAMETGYLDVVCQSLLENINALPGDSRTKIGFISFDSTIHFYNLQ
EGLAQPQMLIVSDIEDIFLPTPDSLLVNLNECKELVQDLLKSLPQMFGKTMETQSALGPA
LQAAFKLLSPTGGRMSVFQTQLPKLGVGALKSREDPNQRASAKEIPNLSPATDFYKKLAL
DCSGQQVAVDLFLLSSQYCDLASLACISRYSAGSVYYYPSYQQQHNPAGVECFQKDLKRY
LTRKIGLEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGFAVQMSIEENLVDM
QSVSFQAALLYTSSKGERRIRVHTMCLPVVNSLSDIFAGADVQAITGLLASMAVDRSVTS
SLSDARDAMTNASIDSLTSYRTSVLTIQQPGLLAPACLRLFPLYILALLKQKAFRTGTST
RLDDRVFAMCQLKYQPLAYVMLMIHPALYRVDDLTDEGALNISERAIPQPRVQQLSVEKL
SREGAFLMDAGSVIYLWIGRNCNPNFLTQVLGVPDYAAVPQNMNLLPELDTAESQRTRAF
VGWLREQRPFFPILHVIRDESPLKASFMQNMIEDRTESALSYYEFLLHVQQQVSK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtacggggttcaactttcagaatggaccaggaggacagccatacgcaaatggt
cccttacagaatcaagtagtgctgcagccaccaggaccgggttacaacatggcccaccag
cctccatacaacccaatgcaagccaagggccccatgccgcctggccctggactctataac
tctgggccctgccagcccatcccaccagtcagctcttaccaggcctccccaggtcagccc
aggttaaacaggcctcctatgggacctccccaccccatgacgccccctcagtccaccagc
ccttgcccaggcctcaggatgcccccagcgcaggccacccctgctctacctgtgtctgct
aacagctactaccagcaccccccagcctggcagtatggggcccttccactgatgggagct
cctccaccaatgggggcgccgcctcctatggccactcctcccctcgcgtttgtggataat
cacgtgacctcctcgcctaacttggcaccactccaggccccctcggcggggtacagcgct
gctccttctcctgtctaccacaacgccatgcaaccctcgggtcctcccttgcctcctacc
tccctgcacagatccacccagccaggctctgcccctcctccaatgaaccctgtggctgct
cctcacacataccagccaggtatgacagcaccttacggccacccacctacaggacccaca
ccctcgatgagacccactccaccccccatgggcaatgctacccctccccttccctttggc
cccaagactgatgctcagtgtgggagtgatgcttgtgatgatgctgcccacactgagtac
gacaaccaggagaatgatattgagtgtccaggacacatacccacacctgctaatggcgct
caagttcccaacagctttgatcacttggagacaagccctaaaatggctggcccaccccag
cagccaggcccccctgttcgacacatgggtctgtcctacccctctttacccccagggtac
cagaacacctccgcctcccccatgcaggcccagacgcagccttacagccatgcacctcag
tcataccagcagccgtctgccggtccagcccagctgagcccctccctggctggtttgagt
ctgcagtcccagacccctgagaccctgagggtggttaacctgctgcaggagaggaacctg
ctccccccgggccccatcacccctcctacaccctgcctgccccaggacctgcagaaaatc
aactgtcacccagaggtcttccgcagtaccctgaccaacatcccccagacccagtctctg
ttaaacaaagccaagcttccactcggcttgctgctccaccccttcaaagatctctcgcaa
ctgcctgtggtcacctccagcactatagtgcggtgtcgctcctgcaggacgtatatcaac
cccttcgtgaccttcctggaccagaggagatggaagtgtaacctgtgctaccgggtcaac
gacgttccagaggaattcatgtacaacccagtcaccagatcatacggagagccacacaaa
agacctgaggtccagaacgccaccatcgagttcatcgcaccctcagaatacatgctgaga
cccccccagcctgccgtttatctcttcgtgctggatgtatcccacaatgccatggaaacg
ggatacctagatgtggtctgtcagtcactgctggagaacatcaacgcgctccctggagac
tccaggacaaagattggcttcatctcctttgacagcaccatccacttctacaacctccag
gaaggcctggcccaaccacagatgctcatcgtctcggacattgaagatatatttttacca
acaccagacagccttttagtgaacctcaatgaatgcaaggagctggtgcaggatctgctg
aagagcttgccccagatgtttggcaagaccatggagacccagtctgctctgggcccggcc
ctgcaggcagccttcaagctgctgtcgcccaccggggggcgcatgtccgtcttccagacc
cagctgcccaaactgggcgtgggggccctcaagtccagagaggaccccaaccagagagct
tcagccaaggaaatcccgaacctgtctcctgccacagacttctataagaagctggcccta
gactgttcaggacagcaggtggctgtggacctattcctactgagctcccagtactgtgac
ctggcctctttagcttgcatatccaggtactcagcaggaagtgtgtactactacccctca
taccagcagcagcacaacccagccggggttgagtgcttccagaaggatctcaagaggtac
ctcaccaggaagattggcttggaggctgtaatgaggatccgctgcactaaaggtttgtcc
atccacacgttccatgggaacttctttgtgcgctccacggatctgctctccctgcccaat
gtgaacccagacgcgggctttgctgtgcagatgtccattgaggagaacctggtggacatg
cagtccgtctccttccaggctgcgctgctctacacatccagcaaaggagagagaagaatt
cgagtccacaccatgtgtttgcctgttgtcaactccctgtcagacatctttgctggggct
gatgttcaggccatcactggtctgctggctagcatggctgtggatcgctcggtgacgtcc
agtttgagtgacgcccgggacgcgatgaccaacgcttccattgactctctgacatcctac
cgtacctctgtgctcactatccagcagcctggcctcctggcccccgcctgcctcaggctg
ttccccctctacatcctggccctgctcaaacagaaagccttccgaaccggtacaagcacc
aggctggacgaccgtgtgtttgccatgtgtcagctgaagtaccagcccctggcctacgtc
atgctgatgatccacccagcgctgtaccgcgtggatgacctgactgacgagggagccctg
aacatcagtgagcgtgccatcccccagcccagagtccagcagctatctgtggagaagctg
agcagagagggggccttcctcatggatgctggctcggtgatctatctctggatcggaaga
aactgcaaccccaacttcctcacgcaagtcctgggggtcccagactacgctgctgtgcct
cagaacatgaaccttctcccagagttggacactgcagagtcccagagaaccagagcgttt
gttggctggctgagggaacagaggccctttttccccatcctgcatgtcattagggatgag
agcccactgaaagccagctttatgcagaacatgattgaggatcggacagagtcggccctg
tcttactatgagtttttactccacgtccaacagcaagtctccaagtaa
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