Oncorhynchus kisutch (coho salmon): 109872551
Help
Entry
109872551 CDS
T09179
Name
(RefSeq) tripartite motif-containing protein 16
KO
K28076
finTRIM family protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109872551
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109872551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
ANCHR-like_BBOX
CEBP_ZZ
zf-C3HC4
zf-C4H2
PRP9_N
FAA_hydro_N_2
NYD-SP28
Motif
Other DBs
NCBI-GeneID:
109872551
NCBI-ProteinID:
XP_020319412
Ensembl:
ENSOKIG00005031173
UniProt:
A0A8C7IFN9
LinkDB
All DBs
Position
LG28:complement(16360459..16366453)
Genome browser
AA seq
569 aa
AA seq
DB search
MAESNFPLPPDGFTCLLCADMLRDPVTISCGDTYCLECIKIYWDQYDHLGVYSCPQCRAT
FSPRPVLRRNVPNVTQELELQPFPYLQRDSLCDFCVGRRSKAVKSCLMCLAYYCETHVKP
HYESATFKRHKLVDETGHLDRKICPQHQKGLELFCRSDQMCICVLCTVREHRSHNIISAE
EERAEKQKNLAVTQSEVQHIIQERMKELQELRHHVDVLKSNAQRVISDSDKIFSEMLQAV
DRWHAEVSQLTKANMQVAMSQAEGYVERLEQEILELQRKDVELRQILDTEDNIHFLQNFP
TLCVPPEPTVPKVLINPQFSFGEITKTATDMKEHLDDICKKELSKISKLVSDTPVYILSP
RGGDKQFKAPSRADFQEPKTRADFLRYSCPLTFDPNTAYKELVLFEGNHKVMRKKTVQFY
PDHPERFDGFSQVLCRESLGGFRYYWEAEWSGEFSIGVAYKSISRKSKNSHSLLGYNDKS
WSLLCSDSGYSAWHNKMDKDLPEAPRATRVGVYLDYTANTVAFYSVSEAMELIHKFKAQF
SEPLYAGFGVGSSVSLCQLKENLQLYRAQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtctaacttccccctgcctccagatggcttcacatgtcttctgtgtgcagac
atgctgcgagaccccgtcaccatctcctgtggagacacctactgtctggagtgcatcaag
atctactgggaccagtacgaccacctgggggtgtacagctgcccccagtgccgggccact
ttcagccctcgccccgtgctgagacgcaatgtgcccaacgtgacccaggagctcgagttg
cagcccttcccctacctccagagggattcactgtgtgacttctgtgtaggccgccgcagc
aaggctgtcaagtcctgcctgatgtgcctggcctactactgcgagacacacgtcaagcct
cactacgagtcggccaccttcaagaggcacaagctggtggatgagacgggtcacctggac
aggaaaatctgtccgcagcaccagaagggcctggagctgttctgtcgctcggaccagatg
tgtatctgtgtgctgtgtacagtcagggagcaccgcagccacaacatcatctctgctgag
gaggagcgtgctgagaaacagaaaaacctggcagtgacccagtctgaggtccagcacatc
attcaggagcggatgaaggaactgcaggagttgagacaccatgttgacgttctcaagagt
aatgcccagcgggtgatatcggacagtgataagatcttcagtgagatgttgcaggcagtg
gatcgatggcacgctgaggtgagccagctgactaaggccaacatgcaggtggccatgtca
caggctgagggatacgtggagcggctggagcaggagatcctggagctgcagcgcaaagat
gttgagctgcgccagatcctggacacagaggataacatccacttcctacagaatttcccc
acgctgtgtgttcctcctgagcccacggtgcccaaagtactaatcaacccccagttctcc
ttcggagagatcacaaagactgccaccgacatgaaggagcatctagatgacatctgtaag
aaggagctgagcaaaatctccaagctagtaagtgatacccctgtttacatactttcacca
agaggtggagacaaacaattcaaagcaccctccagggcagattttcaggaacccaaaact
agggcagacttcttgagatattcctgtccgctcacctttgaccccaacacagcctacaaa
gaactggttctgtttgaggggaaccacaaagtgatgcggaagaagacagtccagttttac
ccggaccaccccgagcgattcgatggcttctcccaggttctatgcagggagtcactgggt
gggttcaggtactactgggaagcagagtggagcggggagttctcaatcggagtggcctac
aagagcatcagccgcaagagtaagaactctcacagtctgctgggctacaacgacaagtcc
tggagtctgctctgctctgactcgggctactccgcatggcacaacaagatggacaaagac
ctgccagaggccccgcgggccacacgggttggagtgtacttggactacactgccaacacg
gtggccttctactctgtgtcagaggccatggagctgatccacaaattcaaggcccagttc
tctgaacctctgtatgcaggctttggagtgggttcttccgtgtccctctgccaactaaag
gagaacctccaactttaccgagcacagtga
DBGET
integrated database retrieval system
