Oncorhynchus kisutch (coho salmon): 109872592
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Entry
109872592 CDS
T09179
Name
(RefSeq) TBC1 domain family member 8B-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109872592
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109872592
Endosome - Golgi transport
Rab GTPases and associated proteins
109872592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
AF0941-like
Motif
Other DBs
NCBI-GeneID:
109872592
NCBI-ProteinID:
XP_020319465
Ensembl:
ENSOKIG00005049187
UniProt:
A0A8C7L347
LinkDB
All DBs
Position
LG28:14207865..14228495
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AA seq
1137 aa
AA seq
DB search
MWLKPEEILLKNAFKLWVTEKGNDYFVLQRRRGYGEGGGGLTGLLVGTLDTMLDSTSKVA
PFRILHQTPDSQVYWSIACGGTKEEISQHWEWLEKNIMRTLSVFDSSDDITSFVQGKIRG
LIAEEGKVSCVQEDDPEKFREALLRFEKWFDLPQKEKLVTYYSCSYWRGRVPCQGWLYLS
TNFLSFYSYLLGSEVKLVISWNEIWRLEKTSNVILTESIHVLANGEDHFFSMFLHLNETF
LIMEQLADYSIKRLFDKETFQEEPSLSDPLQITKRGLETHARNEQFRAFFRLPKEENLLE
VYESFLWVPFSHFNTLGKICLSESYLCFASQDGSQCHVIIPMREVIGVEKPDRNSRALIV
CVRGKRALRFSEVRDFERLANAIRKRCGMTASPQHSASTEVIRGECQNLINHFEDNPEEV
ALMVGQKDSSKAVSTEALMTVFHPQDTENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFCT
KKTRDLIVRGIPEALRGELWMLFSGAVNDMATNPGYYSELVDQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEELIRMHLTQLTEHMTDLTFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMEGLISSHDDAEAVTILNKFFDNVTNKD
SPLPQTVQQNSVGNNDKASSISKVDVSDLIKEAYEKYGDMKSEEVESMRKRNKLYVIQTL
EDTTKQNVLRVVSQEVKFSASQLDELYVLFKRQHFLSCYWTMNSPVLLHHDPSLAYLEQY
QLGFHQFSLLFSLLEPWSLCSGKDTLFLWAFRLLDENQDGLVNFKEFCCALDILYSGTFT
NKLTFLFKLHQPPAFTGSPFQSKAQRLPHFIPMTDDISHLSRLTVSDLPEDGVIRKSPER
GRGKVDLQAYLKQWQDEILKKEESIKDLPRINQAQFIQFSKTLYNLFHSDPEEESLYRAV
ARVTSLLLRMEEVGRRLQEPTSPQKSSTSPIQAALEGALPDGEASSTPESSSDTPSTPIT
QEAGSIPQEVEWSFAFEQILASLLNEPVLVRFFERPVDIQARLDHAKCAQLKSKTNK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttaaacctgaagagatattgctgaaaaatgcattcaagttatgggtgacggaa
aaaggcaacgattatttcgtattacaaaggaggcgaggatatggagaaggaggaggcggt
ttgacaggtctcctggttggaactctggatacgatgctggactctacgtctaaagttgca
ccgtttcgcattctacaccagacaccggactcccaggtctactggtcaatagcgtgtggt
ggcaccaaggaggagatcagccaacactgggagtggctggagaagaacatcatgagaacc
ctgtctgtgtttgactccagcgatgacatcaccagctttgtgcagggcaagatcagaggt
ctgattgctgaggaaggaaaggtgtcatgcgtgcaggaggatgaccctgagaagttccgt
gaggcgctgctaaggtttgagaaatggtttgacctccctcagaaggagaagctggtcacc
tactactcctgcagctactggaggggtcgcgtgccctgccagggctggctctacctcagc
accaacttcctgtccttctactcctacctgctgggctccgaggtgaagctggttatctcc
tggaatgagatctggaggctggagaaaacatccaatgtcatcctgacggagagcatccat
gtgttggccaatggggaggaccacttcttctccatgttccttcatctcaatgagacgttc
ctgatcatggagcagctggctgactactccatcaaacgcctgtttgataaggagactttc
caggaagagccctccctctcagaccctctgcagatcaccaagagaggcttagaaacgcat
gctaggaacgagcagttccgggccttcttcaggctgcctaaagaggagaacctgctggag
gtgtatgagagcttcctgtgggtgcccttcagccacttcaacacgctggggaagatctgt
ctttccgagagctacctgtgttttgccagccaggatggcagccagtgccacgtcatcatc
cccatgagagaggtgattggtgtggagaagccggaccgtaacagcagggctttgattgtg
tgtgtgcggggtaagagggctctacggttctctgaagtccgagactttgagcgcctcgcc
aatgcaatccgcaagaggtgtgggatgacggccagtcctcagcactctgcatcgactgag
gtcatcagaggggagtgccaaaacctcatcaatcactttgaggacaacccagaggaggtg
gctttgatggtgggacagaaggacagcagcaaggctgtcagcactgaggccctcatgact
gtgttccatccccaggacactgaaaatctggaccccaaaatgctgaaggagaagatgaag
gagcagtcatggaacatccacttctcagaatatggccgtggcaccagtatgttctgtacc
aagaagacacgagacctgattgtgcgtggcatccctgaggccttaaggggagagctctgg
atgcttttctcaggtgcagtcaacgacatggccactaacccggggtactacagtgagctg
gtggatcagtctctggggaccagcaccctggccactgacgagatagagagagacctgcac
cgctccctaccagagcaccctgccttccagagcgacacaggcatctctgccctgcgcaga
gtcctcaccgcatacgcctacaggaaccccaaaatcggctattgccaggccatgaacatc
ctgacgtcagtccttttgctctatgcaaaagaggaggaggctttctggctgctggtggcc
gtctgtgagaggatgctgcctgactactttaaccgcaggatcatcggtgcactggtggac
caggcagtgtttgaggaactgatccgaatgcacctcacccagctgacggagcacatgaca
gacctgaccttcttctcctccgtgtccctgtcctggttcctcaccctgtttatcagcgtc
ctgccaatagagagcgcagtcaacgtggtcgactgcttcttctacgacggcatcaaagcc
atcctgcagctgggcctggctgtgctcgactacaacatggagggcctgatcagctcccat
gacgacgctgaggcggtcaccatcctcaacaagttttttgataatgtgaccaataaggac
agtcctcttccacaaacagtgcagcaaaactcagtggggaacaatgacaaagcatcatcc
atctccaaggtggatgtcagtgatctcatcaaagaagcctatgagaaatatggagacatg
aaatcagaggaagtagagagcatgcggaaaagaaacaaactatatgttatccaaacgtta
gaggatacaaccaagcaaaatgtgctgcgggtagtgtcacaagaagtaaagttcagtgct
tcccagcttgatgaactttatgtattgttcaagaggcaacatttcctcagctgctactgg
acaatgaacagcccagtgctactgcaccatgaccccagcctggcctatctggagcaatac
cagctgggcttccatcagttcagcctgctcttctccctcctggagccctggtccctctgc
agcggcaaggacaccctcttcctctgggccttccgcctgctggatgagaaccaggatggc
ctcgtcaacttcaaagagttctgctgtgccttggatattttgtacagcggcactttcacc
aacaaactgacattcctgttcaagcttcatcagccaccagctttcacagggagtcctttc
caatcaaaggcccaaagactgcctcactttattccaatgactgacgacatatcccacttg
agtcgattgactgtgtctgaccttccagaagatggcgtgatcagaaaaagccctgaaaga
ggcagagggaaagttgatctgcaggcctacctgaaacaatggcaagatgagatactaaag
aaagaggagagcattaaggatttacccagaataaaccaggctcagtttatccagttttcc
aaaacactctacaacctgttccatagtgacccagaggaagagtctctgtaccgtgctgtg
gctcgagtcaccagtcttctgctgagaatggaagaagtagggcgcaggctccaggagccc
accagtccccagaagtccagcactagccccatccaggctgccctagagggggctctacct
gacggggaggcttccagcacccctgagagcagctctgacacccctagcactcccatcact
caggaggcaggctccatcccacaggaggttgagtggtcattcgcttttgagcagatcctg
gcatccctgctcaacgagcctgtccttgtgcgcttctttgagaggcctgtagacattcaa
gcccggctggaccatgccaagtgtgctcagttgaaatccaagacaaacaagtga
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