Oncorhynchus kisutch (coho salmon): 109872626
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Entry
109872626 CDS
T09179
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04114
Oocyte meiosis
oki04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
109872626
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
109872626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109872626
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109872626
Factors involved in mRNA localization
Trans-acting binding proteins
109872626
mRNA cycle factors
P-body specific factors
109872626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
109872626
NCBI-ProteinID:
XP_031663506
Ensembl:
ENSOKIG00005035997
LinkDB
All DBs
Position
LG28:complement(41693534..41734892)
Genome browser
AA seq
726 aa
AA seq
DB search
MGDYGFGVLVQNNTGNKSAFPVRIHPHLQPPHHHQNASPSPAAFINNTTSGNGSSSGSPW
LFSATAAHSSMQDEILGSEKPKAQQQEMQETQEKQQLSPGHQESVIISELEKARSEENKV
EGSPSEGSNGKEKLRLESPVLTGFDYQETSGLGAPAQSSTSSSLTGFNNWSAAISQTPST
IINEDVSFFNPAASANNGALLFQNFSHHTSPGFGGNFSPQIGPISQHHPPHPHFQHPHNQ
HQQHRRSPASPHPPPFPHRNAAFSQLPHLSNNLNKPPSPWGSYQSPSPSPSSTSWSPGGG
YGGWGGSQGREYRRGLNGGMTPLNSISPLKKTFPNNHVPSQKYSRTSPGFNPKSWMDESV
SRSDNIFPFQERTRSFDGFNMHSLENSLIDIMRAEQDTLKGRLGFTHPGGESPLPINARN
YGRRRGHSSLFPMEDGFPDDERGEQSLPGLGSPHCFPHQNGERVERYSRKVFVGGLPPDI
DEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIEACIEEDGKLY
LCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRL
YGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLD
DQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRH
ISFRWN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacgggtttggagtcttagtgcaaaacaacactggcaacaagtctgcattc
ccagttagaattcacccacatctgcaacctccacatcatcatcagaatgcatctccaagt
cctgctgctttcataaacaataccacatctggtaatggcagtagcagtgggtcgccttgg
cttttttcagccacagctgcccacagcagcatgcaagatgaaattcttgggtctgaaaaa
cccaaagcccagcaacaggaaatgcaagaaacgcaagaaaagcagcaactgtcccctggc
caccaggagtctgtaatcatatctgagttagagaaggcgaggtccgaggagaacaaggtg
gagggcagcccctcagagggtagcaatggaaaggagaagctgcgcctcgagtccccagta
ctgacaggcttcgactaccaagagacatcgggtcttggggctccggcccagtccagtacc
tcctcgtccctgaccggcttcaacaactggtcagcggctatttcccagacaccctccacc
atcatcaacgaggatgtcagcttcttcaacccagctgcatctgctaacaatggggccctc
ctgttccagaatttctcccaccacaccagcccaggctttgggggaaacttctccccccag
attggacccatctcccagcaccatcccccacatccacactttcagcacccacacaaccaa
caccaacagcaccgcaggtccccggccagcccccaccctcctcccttcccccataggaat
gctgcgttcagccagttgccgcatttgtccaataatctgaataaacccccgtcaccttgg
ggtagctaccaaagcccttctccttctccctcttctacctcctggagtcccggcgggggc
tatggtggctggggaggctcccaggggcgtgagtaccgtcggggcctcaacggaggcatg
accccactgaactcaatctccccactgaagaaaacattccccaacaaccacgtgccgtcg
cagaagtactcccgcaccagccctgggttcaaccccaaatcctggatggacgagagtgtg
agcaggagtgacaacatctttcccttccaggagcgcaccagatcctttgatggcttcaac
atgcattccctggagaactctctcattgacatcatgagggccgagcaagataccctgaaa
ggtcgcctaggattcacccatccagggggagaaagtcctctgcccataaatgcaaggaat
tatgggaggagacgaggtcactcttccctgttccccatggaggatggtttccctgacgac
gagcgtggtgagcagagcctgcctggccttggctcgccccactgtttcccccaccagaat
ggggagcgcgttgagcgttactcccgcaaggtctttgtcggtggcctcccgccagatatt
gatgaagatgaaataactgcaagtttccgtcgctttggacacctctttgtggactggcct
cacaaggcagagagcaaatcttacttccccccgaaaggttatgccttcctgctgttccag
gatgagagctctgtgcaggccctgattgaagcctgtattgaagaggacggcaagctctac
ctgtgtgtgtctagccccaccatcaaagacaagccggtccagatccgtccctggaacctg
aacgacagtgactttgtgatggacggctcccagcctctggaccccaggaagaccatcttt
gtgggtggggtgccacgccctctccgtgcagtggagctggctatgatcatggacaggctg
tatggaggcgtgtgctatgcaggcatcgacacagacccggagctcaagtaccccaaggga
gcagggcgggtcgccttctccaatcagcagagctacatcgctgctatcagcgctcgtttt
gtccagctgcagcatggagaaatcgacaaacgggtggaagtgaagccatacgtcttggac
gaccagttgtgtgatgagtgtcagggaactcggtgcgggggcaagtttgcccctttcttc
tgcgccaatgtcacctgtctccagtattactgtgaatactgctgggcggccatccactca
cgcgctggtcgggagttccacaagccactggtcaaggagggaggggaccggcctaggcac
atctccttccgctggaactga
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