Oncorhynchus kisutch (coho salmon): 109872630
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Entry
109872630 CDS
T09179
Name
(RefSeq) nuclear receptor corepressor 1 isoform X2
KO
K04650
nuclear receptor co-repressor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109872630
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109872630
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109872630
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109872630
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
109872630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
109872630
NCBI-ProteinID:
XP_020319521
Ensembl:
ENSOKIG00005038245
LinkDB
All DBs
Position
LG28:complement(22841622..22946093)
Genome browser
AA seq
2491 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPSHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQQQADGHEALEAKRPRMETVSEAHFARGALPGGI
ILPLQSHQVQDSLRANVGEVNKETQFSGMKAESQAPGGLHHVGEVPDSSPSRLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINM
NGLTDDPMKVYKARQFMNVWTEQEKGIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNHQITRSSQEEKSDDKPEEDKLEKSEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASVAA
EEPPPPEPLLPSEPPQPSKPEPTTQKAVREPTKSAPGEPPMDPNRGAGGAAAANGETGET
SRWTEEEMEVAKKGLVEHGRNWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQD
TRRARGDRDPSQSESMASADDDQNPEDSDGGDNSSDTESAPSPSDPSKAGGDSQRGDGAG
GSENQWSNKGQASNGRIQEPSYGELRVKLEKSPEGEAREPGSQEDGERARVAYEGHGHPK
SEPQDVDMKPGGAGEVQVKVEPDSAKEKGEPEKQREGHHSDNDSSATCSADEDVDAEPER
QRIFSSMDKPSLLSPPGSVLMSTAKQAHLNMQQLQQRAAAIPPMVVPFGPGGISIGAPLS
GFAMFQHQITAVHESAHAEEKQRQDQADPERSRQPTNCPGFTNHSPTIVDREGKPFPYMP
YDMKMALEQEAQSGRPGSPYGLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLP
DGVRVTFSRHSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLPSHAVYGGPEG
AKSSVGSISLGLPRQQDPAKPVSYIKQEQCSPRGQSEGLLSRTQYEGVVRGGPMDGGISR
GNSARGSITQGTPALSGSSIAADLLKGTITKLPTEDLSSPEKAREQLAKGHVIYEGKSGH
ILSYDAIKNPREATRSPRTGHELKRSYDMMEVARGHPGREGAPFEGLISRALPRDSPHGE
SKERPMMTGSIMQGTPRTSAEAYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNTIK
EMGRSIHEIPRQEQPGQDPRKTPDMAANIRASMEGSISQGHPLSQSAIKHNVKSLITSPS
RLPHGHTMPPLEAMERAKYEESKAAAEQRARHTSVVNSATSVLRSTHQEQGKSQLSPGMY
QDADARRTPVNYSTSSMSRGSPMLGRGQEGSGKPASHDRKSTMTPTQRDSVPAKSPVSGG
DPNHPMASHSPFDPHHRPIAPGEPRFHLPPHLDPALFHRAVLDPAAYMFPRQPSPTGYHN
TYQLYTMENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQPIALSYPPGARGIIDLAQ
MPPTILLPHPGGTGTPTLDRITYIPGAQPPFPPRPFNQASISPGHQAHLAATAAANQERE
RERERDREHREKEREREHREREQEQRQRERERAVAAAVANDYMRGGPGQPDRPGSRGYLR
SPSPSMRSQEAQQQRPSIFQGANSKGVITPLMPAAAAAQAGARYSTAADALAALVDAAAS
APQMDVNKGKDSSKHDRDDDISLSSSVARRQHEQQQQEADRRSMQSPYGPMSLPGGKLHP
GYAEGPNGPQGSKDKGPPSKSRIEEELRTRGKTTITAANFIDVIITSQIASDKDSRERGS
QSSDSSSSLSSSRYEMPSGGAIDVISPANSPAQSQQQQDDRDRADRDRADRDRADRDRAD
RDRADRERADRDRADRDRAAQAAAQAGMRPFDMIRYRQSAESQQPPSSQADGGYSQSQQV
PKTHRVMTLADHISHIITQDFARNQDPPQSSTTISSSATTTFQSAQLPVSILGPGGRAKV
PSRYSPENQAQAPSHHQRPTPSRVSPDNAPDKPRARPGKSPDRGGRGAIESYEPISPPQS
YQDKQQEAREQQQPQRREADQPEMRGDSRSPGSVSYLPSFFTRLENTSPMVKSKKQEIIR
KLNSSGVSDSDVGNAQPGTEIFNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGN
LEERPEEHQGGPQPSSNTPSNEARQEANPSPSMGKQKLQSKANSRKSKSPNPGQAYTAAE
RPSSVSSVHSEGDYHQQPPAWSWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSIQAQQPPP
GGPLGPQQQQRVWEREPLLSEQYETLSDSDD
NT seq
7476 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctatccccctacccagggcagcttcagcagtgagcagagccgc
tacccatcacactctgtccagtacaccttcagcaccacacgccaccaacaggagttcacc
gtcccggactaccgaggtcacctgcaggaccagcaaggtcgacgaaggccttccttgctt
tcggaattccaccctggaactgagaggcctccagagagacgtcatggctacgagcagcag
ttccacagtgtcacctcccagcagcaggctgacggccacgaggctctggaggccaagcgg
ccccgcatggagactgtctctgaggcccacttcgcccgcggtgccctgcccgggggaatc
attttacccctgcagtcccaccaggtccaggacagcctcagagccaacgtaggggaggtc
aataaggagacccagttcagtggcatgaaagccgagtcccaggctccaggagggctgcac
catgtgggggaggttcctgacagctcaccctccagattgtccaaggaagagctgatccag
agcatggaccgtgtggacagagagatcgctaaagtggagcagcagatcttcaagctgaag
aagaagcagcaacaactggaggaggaagcggcgaagccagtggagccagaaaagccagtg
acccctccccccataccacaggaacacaacaagcaccgcagcattgtccagatcatctat
gacgagaacaggaaaaaagctgaagaggcccataagatattcgaaggtcttggtcctaag
gttgaactgcccctgtataatcagccatcggatacaaaagtttaccatgacaacataaag
actaatcaagtgatgaggaagaaactgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctaatggaggcctgggaaaag
aaggtggagcggatggagaacaacccacgtcgcaaggccaaagatagccgcaccagagag
tactatgagagacagttccccgagatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccattgccagaagcgagcatgagatt
tctgaaatcatcgatggcctttctgaacaggagaataacgagaagcagatgagacagctg
tcagtcatcccacccatgatgtacgacaccgagcagaggcgagtcaggttcatcaacatg
aacggcctgacggatgaccccatgaaggtgtacaaggctcggcagttcatgaatgtgtgg
accgaacaagagaaggggatcttcaaagaaaagtttgttcagcaccccaaaaattttggc
ctcattgcttcttatctagagagaaagtgtgtgtccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacactggtgagacgcaactacggcagacggcgaggg
agaaaccaccaaataacacgatcctcacaagaagaaaagtcagacgataaacctgaagag
gacaagttggagaagtcagagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggaaaagacaaagacaagtgtgacggcggggag
gacgaggacggtaaggagcagagcacgccacgtggcaggaagaccgccaacagccagggc
cggcgcaagggaaggatcaccacgcgctccatggccaatgaggctgcctctgtggcggcc
gaggagccaccgccacccgagcctctcttgccctccgagccccctcagccttccaaacct
gagcctactacccagaaggctgtgagagagcccaccaaatctgcaccgggtgagcccccc
atggaccctaacagaggagcaggaggagctgctgctgcgaacggcgaaaccggagagact
tctcgctggaccgaggaggagatggaggttgccaaaaaagggcttgtcgagcacgggcgc
aactggccagccattgccaagatggtgggcaccaagagcgaggctcagtgcaagaacttc
tacttcaactacaagagacggcacaacctggacaacttgctccagcagcacaagcaggac
acacggcgggcacggggagatcgagacccgtctcagagcgagagcatggcttcagctgat
gacgaccaaaacccagaggatagtgatggtggagataacagctcagacacagagagcgcc
ccgtccccgtcggacccctccaaggccggaggggattcccagaggggagacggagctgga
gggtcagagaaccagtggtccaacaagggccaggctagcaatgggaggatacaggagccc
tcctacggggagctgagggtcaagttggagaagagccccgagggagaggccagagagcct
ggctctcaggaggatggggagagagcacgggtggcctacgagggacatgggcaccccaag
agcgagccccaagatgtggacatgaagcctgggggggccggggaggtgcaggtgaaggtg
gagcctgactctgccaaggagaagggggagccagagaagcagagggaggggcaccactca
gacaacgactccagtgccacctgcagcgccgacgaagatgtagacgctgagcccgagaga
cagaggattttctctagtatggacaagccttcgttgctcagccctcccggctcagtgctg
atgtccacggccaagcaggcccacctcaacatgcagcagctccagcagcgcgccgctgcc
atcccgcccatggtggttccttttggtcctggtggaatttccataggagcccccctcagc
ggttttgccatgttccagcaccagatcacggctgtgcacgagtcagcccacgccgaggag
aaacagaggcaggatcaggctgaccccgagcgcagcagacaacccaccaactgccctggc
ttcaccaaccacagccccaccatagtggacagggagggtaagcccttcccctacatgcct
tatgatatgaagatggctctggagcaggaggcccagtctggtcggccaggctctccctac
gggctctctcccagggacatgagcaaggcctctcctcagcccaatgaccccaacgcctcc
cgctacagcgtgcctccagtgctccagccagctcccaaccaggtggtccagagcctgcct
gatggagtccgtgtgactttctccagacacagccgacccgccaacattccatctcctcct
ccattaattccaacctccaaacccacagacaagccctcctttatccagggtggctccatc
tcccaggggactcctggtacgtacctaccgtctcatgctgtctacggtggcccagagggg
gcaaagagttctgtgggctccatatctctgggcctgcccaggcagcaggaccccgccaag
cctgtgtcctacattaagcaggagcagtgttctccgcgtggccagtctgagggactcctc
tctcgcacgcagtatgagggggtagtcagaggaggcccaatggatgggggtatcagcagg
ggaaactcagccagaggatcaatcacacagggcacgccagccctgtccgggtccagcatt
gcggctgacctgctgaagggcaccatcaccaagctgcccacggaggacctgagcagccca
gagaaggctcgggaacagctggccaagggacacgtcatctacgaaggcaagagtggacac
atcctctcctacgacgccattaaaaacccaagagaggccacacgtagccccaggacaggc
catgagctcaaacgctcctacgatatgatggaggtcgccagaggccaccccgggagagag
ggagcccccttcgaagggttgatcagccgagccctgcccagagacagtccccacggggag
tctaaggagaggcccatgatgactggatccatcatgcaaggtacacccagaacctctgca
gaggcctatgaggagagcatgaagtacggcaagcagataaagagggagagtccacccatc
cgctcctttgagggggggataggtaagggtaagccctacgagggggtgaacaccattaag
gagatgggccgctccatccacgagatcccccgccaggagcagcctggacaggacccccgc
aagacccccgacatggctgccaacatccgagcctccatggagggctctatatcccagggc
catcctctgagccagtcggccatcaagcacaacgtcaagtccctgatcaccagtcccagt
aggctgccccatggtcacaccatgcccccgctggaggccatggagcgggccaagtatgaa
gagagcaaggcggcagcggagcagcgagcgcgccacacctctgtggtcaactcggcaacc
tccgtcctgcgttccacccaccaggagcaaggaaagtcccagctcagcccgggcatgtac
caagatgccgacgcccgcaggaccccggtcaactacagcactagctccatgtccagaggc
tcaccgatgctgggccgaggacaggagggctctgggaagcctgcgtcccatgaccggaag
agtaccatgacccccactcagagggacagtgttccagccaagtctcctgtgtcagggggt
gaccccaaccaccctatggcctcccacagccccttcgacccccaccaccgccccatagcc
cccggagagcccaggttccacctacctccacacctagaccctgccctcttccacagggct
gtcctggacccagctgcgtacatgttcccgaggcagccgtccccaacgggctaccacaac
acctaccagctgtacaccatggagaacacgaggcagaccatcctcaatgattatatcacc
tcccagcagatgcaggttatcccacggcccgacgtcgccaggggcctgtcgccacgggaa
cagcaaccgatagctctgtcttaccctcccggagcgcgagggattattgatctagcccag
atgcctccaactatcctgttgcctcaccctgggggaacaggtactcccactttggaccgc
atcacctacatccctggagctcaaccccctttccctcctaggcctttcaaccaagcctcc
atatctccaggccaccaagcccacctcgcagctactgcagcggccaaccaggagcgagaa
cgtgagagggagcgtgatcgggagcaccgagaaaaagagagagaaagggagcacagggag
cgggaacaggagcaaagacaacgagagcgtgagcgagcagtggctgcagcggttgccaat
gactacatgcgtggaggtcctgggcagccagacagaccaggtagccgtggatacctgcgt
agcccctccccctctatgagatcacaggaagcccagcagcagcggcccagcatcttccag
ggagccaacagcaagggcgtcatcacccctctcatgccggcagcggcagcagcccaggca
ggagcccgttacagcactgcagccgacgccctggctgccctggtggacgccgccgcctcc
gcccctcaaatggacgtcaacaaaggcaaggactcttccaagcatgaccgagatgacgac
atatctttatcatcctcggtggccaggcggcagcacgagcagcagcagcaggaggcagac
aggcgctccatgcagtctccctacggcccaatgtctctgccaggggggaaactccaccca
ggatacgctgaggggcccaatggtccccaggggagtaaggacaagggtcctcccagcaag
tcacgcatcgaggaagagctgaggaccagaggaaagaccaccatcacggccgccaacttc
attgacgtcatcattacgagccagatcgcctcggacaaggactcccgggagagaggctcc
cagagctccgactcctccagcagcttgtcgtccagtaggtatgagatgcccagtggagga
gccatcgatgtgatcagcccagccaactctccagcccagtcccagcagcagcaggacgac
agggaccgggccgacagggaccgggccgacagggaccgggccgacagggaccgggccgac
agggaccgggccgacagggagagggccgacagggaccgggccgacagggaccgggccgca
caggcagcagcacaagctggcatgcgtccctttgacatgatccgctaccgccagtcagca
gagtcacagcagcccccctcctcccaggctgacggagggtactcccagtcccagcaggtc
cccaagacccaccgggtcatgaccctggctgaccacatctcgcatatcatcacccaggac
tttgccaggaaccaggaccctcctcagtcctccactaccatctcctcctctgccaccacc
acattccagagtgcccagctgcccgtgtctatcttgggccctgggggtcgtgccaaggtc
cccagccgctacagcccagaaaaccaggcccaggccccatcacaccaccagagacccaca
cccagcagagtgtctcccgataatgcccctgacaagcccagagccagacctggtaaatcc
cctgatcggggtggcaggggagcgatagagagctatgagcccatctcccctccccagagc
taccaggataaacaacaagaggctagagagcaacagcaaccacagaggcgagaggctgac
cagcctgagatgaggggtgactctcgctcccctggcagtgtcagctacctgccctccttc
ttcaccaggctggagaacacctcccctatggtgaaatccaagaagcaggagatcattcgt
aagttgaactcctctggtgtcagtgattctgatgttggaaatgcacaaccaggcacagag
atcttcaacttgcctgctgtgaccagctcaagtagcgtgaaccccaggaaccactccttc
agcgacccggccagtaacctgggcctggaggacataattcgcaaggccctgatggggaac
ctggaagaaaggccagaggagcaccagggagggcctcagcccagctctaacacccccagt
aacgaggcccgccaggaggccaacccttcacctagcatgggcaaacagaaactgcagagc
aaagccaacagccgaaagtcaaagtcgcccaacccaggccaggcatacaccgcagcagag
cggccctcatcagtctcttccgtccactcagagggagactaccaccagcagcccccagcc
tggtcctgggaggaccggccctcgtccacaggctccatgcaattcccctataaccccttg
accatgcgcatgctgagcagcaccccccccacctccatacaggcccagcagcccccacct
ggaggccctctggggccccagcagcaacagcgtgtatgggagcgagagcccctactgtcg
gagcagtatgagaccctgtcagacagtgacgactga
DBGET
integrated database retrieval system
