Oncorhynchus kisutch (coho salmon): 109872771
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Entry
109872771 CDS
T09179
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109872771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109872771
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109872771
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
BNR_2
SNAPC3
Motif
Other DBs
NCBI-GeneID:
109872771
NCBI-ProteinID:
XP_020319682
Ensembl:
ENSOKIG00005020476
LinkDB
All DBs
Position
LG28:complement(38801089..38836043)
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AA seq
385 aa
AA seq
DB search
MPQTVTLKGPSPWGFRLVGGRDFSTPLTISRVTPDSKAAQGDLCPGDTILAINGDSTETM
THMEAQNRIKACMGELTLAVSRCEDKVWSPTVIEDGKTSPFMATLESESPQNFRPISTGP
ITGGYISGYSSGHNGSGYSSGHNGSGYSRKPSNISEAPHLNNGTSKQLNNMQYNNPAGLY
AHNNGSNGDRDRVLPKQMGSLSLSSPHSPEPPTHSPLGRNGNGPSFEVTTESDVYKMLQD
PEEPASAPKQSGSFKYLQGILEAEDGGVSPTDRSGVRSLRSPVQSPVPKLGSPIPGPMGP
MPGLQKLPQCTRCGNGIVGTIVKARDKLYHTECFMCDDCGLNLKQRGYFFIEENLYCETH
AMARVQPPEGYDVVAVYPNSKVELV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaccgtgacactgaagggaccctcaccttgggggtttcgactggtcggtgga
agggactttagtactccgttaactatttcgagggtaacaccggacagtaaggcagcacag
ggggacctgtgtcctggggacaccatcctggccatcaatggcgacagcacagagaccatg
acccacatggaagcccagaacaggatcaaggcctgcatgggggagctcacactggccgtc
agcaggtgtgaagacaaagtctggtctccaactgttattgaagatggcaagaccagtcca
ttcatggctacgttggagtctgagtccccacagaatttccgaccaatcagcactggacca
atcaccggtggatacattagtggctacagcagcggtcacaacggcagtggatacagcagc
ggtcacaacggcagtggatacagccgaaaaccctccaacatctccgaggcgccgcacctc
aacaacggcacctccaagcagctcaacaacatgcagtacaacaacccagccggcctgtac
gcacacaacaatggcagcaatggagaccgagacagggtcttgccaaaacaaatgggcagc
ctgagcctgagctccccacacagccctgagcctccgacgcattctcctctgggacgtaat
gggaacggtcctagttttgaagtcaccacagagtcagacgtgtataagatgctgcaggac
ccagaggagccagcctctgcacccaaacagtccggctccttcaaatacctacagggcata
ctggaggcagaggatggaggtgtgtcccccactgacagatctggagtgagaagcctaagg
tccccagttcaatccccagtccctaaattgggcagccccattcctggtcccatgggcccc
atgcctggcctacagaaactcccccagtgcacgcgctgtggcaacggcatagtgggcacc
atcgtgaaggccagagacaaactgtaccacacagagtgcttcatgtgtgatgactgcggc
ctgaacctcaagcagaggggctacttcttcattgaggagaacctgtactgtgagacccac
gccatggcccgtgtccagcctcctgagggatatgacgtggttgcagtctaccccaattcc
aaggttgaactggtctga
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