Oncorhynchus kisutch (coho salmon): 109872839
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Entry
109872839 CDS
T09179
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109872839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109872839
03032 DNA replication proteins [BR:
oki03032
]
109872839
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
109872839
Prokaryotic type
109872839
DNA replication proteins [BR:
oki03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
109872839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
PUA_elF2D
Motif
Other DBs
NCBI-GeneID:
109872839
NCBI-ProteinID:
XP_020319789
Ensembl:
ENSOKIG00005046723
LinkDB
All DBs
Position
LG28:complement(10038282..10045315)
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AA seq
528 aa
AA seq
DB search
MRIEHTCPPQSHCTPKMADVEMNSAKKQKKKKGKTVSDDDVGDIQESGDFLIKPESKVAS
LDTSQWPLLLKNFDKLNIRTAHYTPLPNGSNPLKRSIQDYVRTGFINLDKPANPSSHEVV
AWIRRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLHNAIENE
HTLARGIETLTGALFQRPPLIAAVKRQLRVRTVYESKLIEYDPERRLGIFWVSCEAGTYI
RTLCVHLGLLLGVGGQMQELRRVRSGVLGERDNLVTMHDVLDAQWQYDHNKDETYLRRVI
YPLEKLLVSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEMNQDIVVITTKGEAICIA
TALMTTAVISTCDHGVVAKIKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKRGKAND
STPSDWKDGYVDYSASKPKAEETGNGDAKRKREDSDSDAAAASAPSTPLAEDPKKEKEKK
KKKKEKKQKLEHPAAEAAEPAAETEGEVGESAKKKKKKKKKEADAEAE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgaacacacgtgtccccctcagtctcattgcacaccgaagatggcggacgtt
gaaatgaactctgccaaaaaacagaagaagaagaagggaaagacagtttctgatgatgac
gttggggatattcaggagagtggtgatttcctcatcaaaccagagtccaaagttgccagt
ctggacacatctcagtggccattgctgttgaaaaattttgacaaactcaacattcggaca
gctcactacacacccttgccaaatggctcaaaccctttgaagaggagcattcaggattat
gttcggacaggcttcatcaacttggacaagcctgcaaatccctcctctcatgaggtggtg
gcctggatccgacgtatcctgcgagtggagaagactggccacagtggcaccctggacccc
aaggtgaccggctgcctcattgtgtgtgtggacagagccacacgactggtcaagtcccag
cagagtgcaggcaaagagtatgtgggaattgttcggctgcacaatgctattgagaatgag
cacacacttgctaggggaattgaaaccctcacaggtgccttgttccagcgaccacctctc
atcgcagccgttaagcgccagttgagagttaggaccgtttatgaaagcaaactcattgag
tacgacccagagaggagattgggtattttctgggtgagctgcgaggcggggacctacatc
aggaccctgtgtgtccacctggggctcctccttggtgttggtggtcagatgcaggagctg
aggagagttcgctctggtgttctgggagagagggacaacctggtgaccatgcacgatgtg
ctggatgctcagtggcagtatgaccacaacaaggacgagacgtacctgcgcagagtcatc
tacccactggagaagcttctggtgtcgcacaaacgtttggtcatgaaagacagtgcagtg
aatgcgatctgctatggagcgaagataatgttgcctggtgtcctacgatatgaggatggc
attgagatgaaccaagatattgtggtgataacaaccaaaggagaggccatttgtatagct
actgccctcatgactactgcagtgatctccacgtgtgaccacggtgtcgtggccaagata
aagagggtcatcatggaacgtgacacctacccccgcaagtggggcttggggcccaaggcc
agccagaagaagatgatgatccagaagggactgctggacaaacgtggcaaagccaacgac
agcactccatcagactggaaggatggctatgtagattacagtgcgtccaagcccaaggct
gaagaaaccggcaatggggacgcaaagaggaagagggaagacagcgatagtgatgctgcg
gcagcctctgcaccttccactccattggcagaagaccccaagaaggagaaggagaagaag
aagaaaaagaaggaaaaaaagcaaaaactggagcacccagctgcagaggcggcggagcca
gcagcagagacggaaggagaggtgggcgagagtgccaagaagaagaagaagaagaagaag
aaggaagcggatgcagaagcggagtga
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