Oncorhynchus kisutch (coho salmon): 109872851
Help
Entry
109872851 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109872851
04082 Neuroactive ligand signaling
109872851
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109872851
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109872851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
109872851
NCBI-ProteinID:
XP_020319799
Ensembl:
ENSOKIG00005030557
LinkDB
All DBs
Position
LG28:39658501..39690197
Genome browser
AA seq
477 aa
AA seq
DB search
MRILGFWVTNHSPTMGGRTGTAILLCVWACLLVANVLCGKSSGQNGQTDEQKDNTTVFTR
ILDSLLDGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKF
KGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRA
ECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQS
VDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTV
FGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAW
DGKSVVPEKQKKKKESLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKE
EPKPKPPEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcctgggcttttgggtgacaaaccactctccaaccatgggtggacggacagga
acggccatactgctatgtgtgtgggcctgtttgctggtggccaacgtgctttgtgggaaa
agctctggacagaatggccagacggacgagcagaaagacaacacaacagtgttcacccgg
atcctagacagtcttctagatggctacgacaatcgtctcagaccagggttgggagagcgt
gtaactgaagtcaagactgacattttcgtgacgagtattgggcccgtctcggaccatgac
atggaatacaccattgatgtgttcttccgtcaaagctggaaggacgagcggctaaaattt
aaagggccaatggcggttctccgtttgaacaacctgatggccagtaaaatctggacccct
gacacattctttcacaatggcaagaagtctgtggcacacaacatgactatgcccaacaaa
ctcctacgaatcacagaggagggaactctgctctatactatgagactgaccgtaagggca
gagtgtcccatgcacctggaggacttccccatggatgcccatgcttgcccactgaagttc
ggcagctatgcttacaccagggctgaggttgtgtacgtgtggacgagaggggcagcccag
tctgttgtggtggctgaagatggctctcggctcaaccagtatgatctgatggggcaaagc
gtggactctggggttgtccagtccagcacaggagagtatgttgtcatgacgacacacttc
cacctgaagaggaagattggttattttgtcatccagacgtacctgccctgcatcatgacg
gtgatcctgtcccaggtgtccttctggctcaacagagagtccgtcccagccaggactgtg
ttcggagtgacaactgtgctgaccatgaccaccctcagtatcagtgctaggaactctctc
cccaaggtggcctatgccacagccatggactggttcattgcagtctgctatgcctttgtc
ttctctgccctcattgagtttgctacagtcaactacttcacaaagaggggctacgcctgg
gatggaaaaagtgtggtgccagagaagcagaagaagaagaaggagtctctcctgaagaag
aacaacaccaccgcctacactgccgccactgctacagccttcgctccaaacattgccaga
gatcctggtttggccaccattgccaaaagtgctccccctccccccactgagcccaaggaa
gagccaaagcccaagccaccagaggccaagaagaccttcaacagcgtcagcaagatcgac
aggatcgccagaatagccttccccttactcttcggaacctttaacctggtctactgggca
acttacttgaataaaaagcctaagttacagggtatgaccccaggatcccactaa
DBGET
integrated database retrieval system
