Oncorhynchus kisutch (coho salmon): 109872854
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Entry
109872854 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109872854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109872854
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109872854
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
109872854
NCBI-ProteinID:
XP_020319809
Ensembl:
ENSOKIG00005030442
LinkDB
All DBs
Position
LG28:39622945..39645006
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AA seq
468 aa
AA seq
DB search
MEIITVDHGFVALECLRGMAFVFNCFFLSCVSNVWGNHVKSTQTENIYLDNITRVLDRLL
DGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEI
LRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRL
MNFPMDGHACPLKFGSYAYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERL
KSNTGEYVVMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTV
LTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAA
SIKAAQEAAEAGRTDGESSSDASSMLKKRMNSTPHFERPAEVFPNPPVNAQAFLQQGSAV
PSNNLLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaattataacagttgaccacggctttgtggctttggagtgtttacgaggcatggct
ttcgttttcaattgtttttttctgtcctgtgtgagcaatgtttggggaaatcatgtgaaa
tcaacgcaaactgagaatatctatttggataacatcacgcgtgtattggatagattacta
gatggatatgataacagactgcgacctggatttggaggtccagttactgaggtcaaaaca
gacatctttgtcacaagctttggtccagtgtcagatgttgagatggagtacaccatggat
gtatttttccgtcaaacgtggattgacgagaggttgaaattcgagggccccatcgagatt
ctgcgtctcaacaacctcatggtcagcaagatctggacaccagacacattcttccggaac
ggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgcatcatgcag
aacggaactatcctctacactatgagattgacgataaacgcagagtgtcccatgagactg
atgaacttccccatggatggccatgcctgtcctctcaagtttggtagctatgcctaccct
atgagtgaaattgtgtacacatggaaaaaaggaccactgttctctgtggaagtcccagag
gagtcctccagcttactacagtatgatctaataggacagacagtgtccagtgagaggtta
aaatccaacactggtgaatatgtagtcatgactgttcacttccacctgcaaaggaagatg
ggcttcttcttgattcagacatacatcccctgtatcatgaccgtgatcctggctcaggtc
tctttttggatcaataaggaatcggttccagcacgaactgtattcggcattaccacagtg
cttaccatgaccacactcagcatcagcgcccgccactctttgcccaaagtctcttacgcc
acggccatggactggttcatcgctgtgtgtttcgccttcgtcttctcagccctcattgag
tttgccgcagtcaactacttctccacgctgcaggccaaccgggagctccgcaaggcggcc
tccattaaggcagcccaggaggcagcagaggccgggaggaccgacggggagtcctcttcg
gacgccagcagtatgctgaagaagaggatgaactccacgcctcactttgagaggccagcg
gaggtgttccctaaccctccagtgaatgcccaggccttcctccagcaaggctcagccgtg
ccgtccaacaacttactgacaggcaccagcatcatagacaagtactctcgcatcctcttc
cctctgtcgttcggggccttcaacctggtgtactggatcgtctatctcactaaggacacc
atggagatgacaagggacagcgtgtga
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