KEGG   Oncorhynchus kisutch (coho salmon): 109872879
Entry
109872879         CDS       T09179                                 
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109872879
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109872879
   03400 DNA repair and recombination proteins [BR:oki03400]
    109872879
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     109872879
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109872879
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 109872879
NCBI-ProteinID: XP_020319875
Ensembl: ENSOKIG00005020220
LinkDB
Position
LG28:complement(32535287..32555346)
AA seq 803 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLNAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGCNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNTDDKLQIYRENFEKAYMDSTERFYRTQAPSYLQQNGVQNYMKYADAKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTSFKETILSECPGMIKQNETESEYGRSAPG
TKGSASSELHLMFSLMDKVPSGIEPMLNDLEDHIMSAGLADMMASAETITSDSEKYVEQL
LTLFNSFSKLVKDAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGLSVRVGLKTQP
ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR
RLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSDDLNQNFKECHKHNKLA
LSGKPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLM
SNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSL
VAFPKLKRQVLFYDPVVGSPKDFAEGTLFYVNQEFSLIKNSKVQKRGKINLIGRLQLTTE
RMREEENEGIVQLRILRTQEAIIQIMKMRKRITNAQLQTELVEILKNMFLPQKKMIKEQM
EWLIEHKYIKRDETDLNTFLYMA
NT seq 2412 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttgctaaagaacaaaggctccctccagttcgaggacaagtgggac
ttgatgcgtcccatcgtcctcaagctgctccgccaagagtcagtcaccaaacagcagtgg
ttcgacctcttctcagatgtccatgcagtatgcctatgggatgacaaggggccggccaag
attcaccaggccctgaaagaggacatcctagacttcatcaagcaagcacaagcacgggtg
ttgagccaccaggatgacacggcgctgctgaatgcctacatcgttgagtggaggaagttc
ttcactcagtgtgacatcctgcccaaacccttctgccagctggaaattacgctcatgggc
aaacagggctgcaacaagaagtctaacgtagaggacagcatcgtacggaagctcatgctg
gacacgtggaacgagtccatcttctccaacatcaaaaataggctccaggacagcgccatg
aagctggtgcatgccgagcgcctgggggaggccttcgactctcagctggtcattggtgtc
agggagtcttatgtgaacctgtgctcaaacacggatgacaagctgcagatttacagagag
aactttgagaaggcctacatggactccaccgagaggttctacagaacacaggccccctcc
tacctgcagcagaatggagttcaaaactacatgaaatatgcagacgccaagttgagagag
gaggagaaacgggcgctgcgctacttggagacgagacgggaatgtaactctgtacaagca
ctgatggagtgttgcgtgaacgccctggtgacgtcctttaaggagaccatcttgtccgag
tgtccaggcatgatcaagcaaaatgagacagagagtgagtacggccggagtgctcctggc
accaaaggctcggccagctcagagctccacctcatgttctctttgatggacaaggtgcct
agtggcatcgaacccatgctgaatgacctagaggaccacatcatgtctgctgggctggcc
gacatgatggcctccgccgagaccatcacctcggactctgagaagtacgtggagcagctc
ctcaccctgttcaacagcttcagtaaactggtgaaggatgcctttcaggatgaccctcgc
ttcctcacagccagggacaaggcttacaaagcagttgtgaacgacgctaccatttttaaa
ttagaactcccgctgaagcagaaaggtctgtctgtcagggtgggtctgaagacccagccg
gagtcaaagtgtccagaactgctcgccaactactgtgacatgctgctgaggaaaaccccg
ctcagcaagaaactcacctccgaggagatcgaggccaagctcaaggaagtgttgctggtg
ttgaagtacgtgcagaacaaagacgtgttcatgcgctaccacaaagcccatctgacgcga
cgcctcatcctggacatctccgccgacagcgaaatcgaggagaacatggtggagtggctc
agggaggtaggcatgcccgcggactacgtgaataagctggcccggatgttccaggacatc
aaggtgtccgatgatctcaaccagaacttcaaagagtgtcacaaacacaacaagctggcc
ctatcaggtaaaccagcggactctgtcaacatcaagatcctgaatgctggggcgtggtct
cgaagctcagagaaggtgtttgtgtcactgcccactgagctggaggatctcatccccgag
gtggaggacttctacaagaagaaccacagcggcaggaaactgcactggcaccacctcatg
tccaatggcattatcacctttaagaacgaggtgggacagtacgacctggaggtgaccacc
ttccagctggcagtgctttttgcctggaaccagaggccccgggagaggatcagctttgag
aacctcaagctggccacggagctgcctgacgctgagctccgacgcaccctatggtccctg
gtagcgttccccaagctaaagcggcaggtgttgttctacgaccccgtggtgggctcgccc
aaagactttgccgagggcacactcttctacgtcaaccaggagttctcactaataaaaaac
tccaaggtccaaaagagggggaagatcaacctgattggccggcttcagctcaccacggag
cgaatgagggaggaggagaacgaaggaattgtccagctcaggatattgagaacacaggag
gccatcatccagatcatgaagatgaggaagaggatcaccaatgcccagctgcagacggag
ctggtggagatcctcaaaaacatgttcctaccccagaagaagatgatcaaggagcagatg
gagtggctcatcgagcacaagtacatcaagcgcgacgagactgatctcaacaccttcctc
tacatggcgtag

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