KEGG   Oncorhynchus kisutch (coho salmon): 109872910
Entry
109872910         CDS       T09179                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109872910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109872910
   03032 DNA replication proteins [BR:oki03032]
    109872910
Spliceosome [BR:oki03041]
 Complex A
  U1 snRNP components
   Sm proteins
    109872910
  U2 snRNP components
    109872910
 Complex B
  U1 snRNP components
    109872910
  U4/U6.U5 tri-snRNP components
    109872910
 Complex C
  U2 snRNP components
    109872910
DNA replication proteins [BR:oki03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     109872910
SSDB
Motif
Pfam: LSM Hfq GIT1_C
Other DBs
NCBI-GeneID: 109872910
NCBI-ProteinID: XP_020319927
Ensembl: ENSOKIG00005034433
UniProt: A0A8C7IXC0
LinkDB
Position
LG28:36782563..36785377
AA seq 121 aa
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKSNTQVLVNCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGTGG
K
NT seq 366 nt   +upstreamnt  +downstreamnt
atgagtttgctgaataaacccaagtctgagatgactccagaagagttgcagaaacgagag
gaggaagaattcaacactggaccactgtctgtgctcacccagtccgtgaaaagcaacaca
caagtcctcgtcaactgccgcaacaacaaaaagctacttggacgagtcaaagccttcgac
aggcactgcaacatggtgttggagaatgtgaaggagatgtggacagaggtcccgaagagt
ggcaaggggaaaaagaagtccaagccagtgaacaaggaccggtacatctctaagatgttt
ctgagaggggactctgtcattgttgtgttgaggaaccctcttatcactgggactgggggg
aagtag

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