Oncorhynchus kisutch (coho salmon): 109872916
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Entry
109872916 CDS
T09179
Name
(RefSeq) roundabout homolog 2-like isoform X1
KO
K06755
roundabout, axon guidance receptor 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109872916
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
ROBO family
109872916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Sp38
fn3_4
Izumo-Ig
CBX7_C
Motif
Other DBs
NCBI-GeneID:
109872916
NCBI-ProteinID:
XP_031663947
Ensembl:
ENSOKIG00005039737
LinkDB
All DBs
Position
LG28:29998986..30114487
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AA seq
1403 aa
AA seq
DB search
MEFRLTLDTLLVFIVLIGLVFGSRPRLEDAPPRIVEHPSDLIVSKGEPATLNCKAEGRPS
PMVEWYKDGERVETDREDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGVYVCVARNYLGEA
ISRNASLEVAILRDDFRQTPSDVVVAAGEPAVMECIPPRGHPEPTISWKRNNMKVNDHDE
RITIRGGKLMISNTRKSDAGMFVCVGTNMVGERDSDPAELVVFERPMFVKRPVNQVVLAD
DTVDFLCEAHGDPAPTIRWRREEGELPRGRSDIRSDHSLRLTQVRAEDEGTYTCVSENSV
GKAEASGSLQVHVGPFMPPQIVVRPRDQITAQGRTVNFLCGTKGNPPPAVFWQKEGSQIL
LFPIQEAAQSGRFSVSLSGELTITDVHSEDSGYYICQAISVAGSILTKALLEVESASSDR
VPPIIRQGPANQTLAPGSTAHLQCHVMGNPLPSIQWEKDGQRILGDERVSLMENGMFQIT
NLQETDSGAYTCMASSSSGETMWSGVLTVKESGGSSVPQASEPFQLPGPPQKPVVTDVTR
NSVTLTWQPNAHEGGAAVTSYIIEAFSQSAGSTWQTVADLVKLEKHTVSGLFPNTIYLFI
VRAVNAYGLSDPSPISEPVRTQDGSPTGQGVDHRQVQRELGEVGVHLQEPVTLTASSVQV
SWMVDRQSQYIQGYRLLYRPSGGTWQLQDIKAPSERLAVVANLLTGTEYEIKIRPYFDEF
QGKDSRLLLIRTAAEVPSAPPRAVNVVTVKLSNSSSISVSWEPPPADMQNGIIQEYKVWC
VGNDTQTRYHINTTVDGTVLSTVLKGLLPGILYQVEVAAVTSARVGIHSQPVSVLIKLPV
EAPSVPGTGGGAEGDESSVSLAEQITDVVKQPAFIAGIGGACWVILMGFSVWIYCRRKKR
KELSHYTASFNYTPAVGFPHGETSGLSGRPGMLGGNMGNYPWLADSWPTTNLVHSGKEAV
KCCTSKHDTAERYYNEAGISNYLNQTEKYSTGSSNEGPIYSTIDPNAEDLRSFNSPYSST
TPYASTPIMPFTNQTLQGSHSPTEQDGSHWITQPAGPSSQYAQPERCRTDCGKPKQKSMG
KAVKTPSLKWTEALPPPPSSGELEQCVVEDMPMDDHEDMELGSDEEEWCPPLPERTYLIE
GCEAGPAPPLRGDASSPATSYSHQSTATLTPSPREESRHPPHNTARLHHLDGQQLACRLP
CDPVPVPRAPSPPLTQSNPNLSAQQHGEGSEVGTPLRNGLAHRRDLSQGAALSADNVSSS
TPVRAQPSPDDNTHTPPGLKSRVKKKTSKSGAYRREVLNQGDLPPPPEPPPENGAVRCPA
RAVDCGQASLDREGERSNPYRKGSGQRRRDDEDLIPYSKPSYLAGRGCQMSSNCSTTGSS
SSRGSTGSRGGPGSGRKRNEEMR
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcgcctcacgttggataccctattggtttttattgtgcttattggtttggtt
tttggatcccggcccaggttagaggatgcccccccgcggattgtggagcacccctctgac
ctgatcgtgtccaagggcgaaccagccaccctcaactgcaaggccgaggggcgtcccagc
cccatggtggagtggtacaaagatggcgaacgagtggagacagacagggaagacccacgc
tcccaccgtatgctgctgcccagcggctccctcttcttcctgcgtattgtccacggtcga
cggagcaagcctgacgagggggtctatgtgtgcgtggcacgcaactacctaggagaggcc
atcagtcgcaatgcatcgctggaggtggcaatcctgagggatgacttcaggcagacaccc
agtgacgttgtggtggcggcaggggagccagcggtcatggagtgcatccccccgcggggc
cacccggagcccaccatctcctggaagaggaacaacatgaaagttaacgaccatgacgag
aggatcaccattcgaggaggcaagctgatgatttcgaacacaaggaagagcgacgcaggc
atgtttgtgtgtgtgggcaccaatatggtgggggaaagggacagcgacccagcagaacta
gtggtgtttgagcgacccatgttcgttaagcgtcctgtgaaccaggtggtgttggctgat
gacacggtggacttcctgtgtgaggcccatggagaccccgcccccaccatccgctggagg
agagaggaaggagagctgccccgtggcaggtcagatatccgtagtgaccacagcctgcgt
ctgacccaggttcgggctgaggacgagggcacctacacctgtgtgtctgagaatagcgtg
ggcaaggcagaggcatcgggcagcctgcaggtccatgtgggtccattcatgccccctcag
attgtggttcggccccgggaccagatcacagcccagggtcgcactgtaaacttcctctgt
ggaaccaagggcaaccctccacctgccgtgttctggcagaaagaaggcagccagatcctg
ctgttccccatccaggaagctgcccagtcgggacggttctctgtgtctctgagcggggag
ctgaccatcacagacgtccacagtgaggactcgggatactacatctgtcaggctatttct
gtagctgggagcatcctcaccaaggccctgctggaggttgagagtgcatcctccgaccga
gtcccacccatcatccgccaaggaccggccaatcaaacgctggcgccgggctccactgcc
catttacagtgccacgtgatgggcaaccctctgcccagcattcaatgggagaaggatggc
cagaggatcctgggagatgagcgtgtcagcctgatggagaacggaatgttccagatcaca
aacctgcaggaaaccgactctggggcctatacctgcatggcttccagctccagcggagaa
acgatgtggagcggcgtactcactgttaaagagagtggaggttcgtctgtgccccaggca
tcagaacccttccagctaccgggacctccccagaagcctgtggtgaccgacgtgacccgc
aacagtgtcaccctcacctggcagcccaacgcccatgaggggggggctgccgtcacctcc
tacatcatcgaggccttcagccaatcagcaggcagtacgtggcaaacggtggctgacctg
gtaaagttggagaaacacactgtcagtggtctctttcccaacaccatctacctgttcatc
gtccgagcggtcaacgcctacgggctgagtgaccccagccccatctctgagcccgtccgc
acacaagatgggagtcctacaggtcagggagtggaccacaggcaggtccagagagagttg
ggagaggtgggtgttcatcttcaggagcctgtcacactcactgcctccagtgttcaagta
tcatggatggtagaccgtcagtcccagtacatccagggctaccggctcctctaccggccc
agtggtggcacctggcagctgcaggatatcaaggccccgtcagagcgcctggccgtggtc
gccaacctgctcacaggcacagagtatgagatcaagatccggccctacttcgacgagttc
cagggcaaggacagtcggctgctgttgatcagaacagcagcggaagtcccaagcgcccct
cccagagcagtcaacgtggttacagtgaagctgagcaacagctccagtattagtgtctcc
tgggagcctccacccgccgacatgcagaatggaataatccaggagtacaaggtgtggtgt
gtgggcaatgacacccagacccgctaccacatcaacaccaccgtggatggcactgtcctc
tccaccgtactcaagggactgctgccaggcatcctgtaccaggtggaggtggcagcagtg
accagcgccagagtgggcatccacagccagcctgtgtccgtcctcatcaagctgccagtg
gaggcaccgtcagtgcccggtaccggggggggcgcggagggtgatgagagcagtgtgagc
ctggccgagcagattactgatgtggtgaagcagccggcattcatcgctgggatcggcggg
gcctgctgggtcatcctcatgggtttcagcgtgtggatctactgccgccgcaagaagagg
aaggagcttagtcactacactgcatcgttcaactacacgcctgctgttggctttccacat
ggagagacatctggacttagtggaaggcctggcatgctgggtggcaacatgggcaactac
ccatggctggcagactcttggcccaccaccaacctggtccacagtggcaaggaggctgtc
aaatgttgcacctccaaacatgacacggcagagagatactacaatgaagcgggcatctct
aactacttgaaccagacagagaagtacagcacgggcagctccaatgaaggtcctatctac
agcaccatcgaccccaacgccgaggacctgcgtagcttcaacagcccctactcctccacc
acgccctacgccagcactcccatcatgcccttcaccaaccagacgctccagggctctcac
agccccacagagcaagatggcagccactggatcacccagcccgccggaccctcttcccag
tacgcccagcccgagcgctgcaggacggactgcggtaaacccaagcagaagtccatgggg
aaggcggtgaagaccccctctctaaaatggactgaagccctccccccacccccctcatct
ggggagctggagcagtgtgtggtagaggatatgcccatggatgaccatgaggacatggag
ctagggtctgatgaggaagagtggtgcccaccccttccggaaagaacctatctgatcgag
ggctgcgaggcaggtcccgcccctcccctcaggggtgacgcctcgtcccccgccacctcc
tatagtcaccagtccactgccaccctcacgccgtcgcccagagaggagagtcgccatcca
ccccacaacacagcacgccttcaccaccttgatgggcagcagctagcatgtaggttacct
tgcgatcctgtcccagtgccccgggcgcccagcccgcccctcacgcagtcaaaccccaac
ctctcagcccagcaacacggtgagggctccgaggtgggcacaccgctccgcaacggcttg
gcccaccgccgtgacctcagccagggggcagcactgagtgccgacaatgtcagctccagc
acacctgtgagagctcagccctccccagatgacaacacacacactccccccggcctgaag
tctcgagtgaaaaagaagacttccaaaagcggagcttacagaagagaggtgcttaaccaa
ggagacctccctcctccaccagagccacctccagagaatggagcagtgcggtgcccagca
agggctgtagactgtggccaagcatccctggacagagagggagaaaggagcaacccctac
aggaagggatcaggacagagacgccgagatgatgaggacctgatcccgtacagcaagccc
agctacctggcggggcgggggtgtcagatgtccagtaactgctccactacaggaagctcc
tcgtcgcggggctccacggggtcacgagggggtcccggctcaggcaggaaacgcaacgag
gaaatgagataa
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