Oncorhynchus kisutch (coho salmon): 109873029
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Entry
109873029 CDS
T09179
Name
(RefSeq) cell adhesion molecule 1 isoform X3
KO
K06781
cell adhesion molecule 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109873029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109873029
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
Nectin family
109873029
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
C2-set_3
Adhes-Ig_like
KOW2_Spt5
DUF3439
Syndecan
Motif
Other DBs
NCBI-GeneID:
109873029
NCBI-ProteinID:
XP_020320110
Ensembl:
ENSOKIG00005035202
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All DBs
Position
LG28:28413161..28930629
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AA seq
429 aa
AA seq
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MAITGNGSLATLLFLFVIPAALHKGAAQYPVQSQNLVTDNVEVMEGDVAVISCRVKNNDD
SVIQLLNPNRQTIYFRDVRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIESREGQVIEGNETEMTCTAMGSKPAATIRWMKGDKELQGISK
VEETYDHMFTVTSQLRFIVTKEDDGMPVVCIVDHPAVKDFQALTYLVVHYKPEVKIIVEF
PDGLPREGQNMELSCQAKGKPHPQQINWVKVDDDLPSHALITGPDLYIENLNKTYNGTYR
CFAANSVGESYDDYILYVYDAPTTTPIPTTATTTNPTTTISLPEATADSRAGEGAPRAVD
HAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNN
SDEKKEYYI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacaggcaacggatctctcgctactcttctctttttgttcgtgattccagca
gctcttcacaaaggagctgctcagtacccagtccagagtcagaacctggtgacagacaat
gtggaggtgatggagggtgacgtggccgtcatcagctgcagggtgaagaacaacgacgat
tctgtcatccaactcctcaaccccaacagacagaccatctacttcagagacgtccgaccc
ctgaaagatgctcgcttccagctggtcaacttctcggacaatgagctgcgggtgtctcta
tccaatgtgagcctgtcggatgagggaagatacgtgtgccagctctacacggacccccca
caggaggcctatgcagacatcactgtgctgatccctccaggcaacccaatcatcgagtcc
cgggagggtcaggtgattgagggcaacgagacagagatgacctgcaccgctatgggcagc
aagcccgccgccacaatcagatggatgaagggagacaaagagctccaaggcatatccaag
gtggaggagacatatgaccacatgtttactgtgaccagccagctgaggttcatcgtcact
aaggaggacgacggcatgcccgtggtgtgcatcgtggaccacccagccgtcaaagacttc
caagccctgacgtacctggtggtgcattataaaccggaggtgaagatcatagtggagttt
cctgatggactgccaagggagggacagaacatggagctgtcatgccaggccaaaggcaaa
ccccatccccagcagatcaactgggtgaaggtggacgatgaccttccctcacacgccctc
atcaccggcccggacctgtacatcgagaacctcaacaagacctacaacggcacctaccgc
tgcttcgctgccaactcagtgggcgagtcgtatgacgactacatcctctacgtctacgat
gcccccaccactacccctatacccactacagctaccaccacaaatcccaccaccaccatc
tctctccctgaagccactgcagattctagagctggagagggagcaccgagagcggtcgac
catgcggtcatcggaggagtggtggctgtggttgtctttgccatgctctgtctactcatc
attttgggacggtactttgcaagacacaaaggtacctacttcacgcatgaagctaaagga
gccgacgatgcagcagatgcagacacagccattatcaacgcagaggggggccacaacaat
tcggacgagaaaaaggagtactacatatag
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