KEGG   Oncorhynchus kisutch (coho salmon): 109873089
Entry
109873089         CDS       T09179                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109873089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109873089
Spliceosome [BR:oki03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109873089
 Complex B
    109873089
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 109873089
NCBI-ProteinID: XP_020320201
Ensembl: ENSOKIG00005027183
LinkDB
Position
LG28:8236857..8244504
AA seq 899 aa
MCSISMADKNGKKGKPVGVKRTLTKREQEDLKKKEQEKAADVFEEFLASFDSNDKSGVKT
FVRGGIVNATKEEEAAEVKKSKLYRPNTKFTSVSQNVSPAHSSEVRRPIVKKKTEEKKKS
NLELFKEELKQIQEEREERHKKKKNEPGGGYGELDIPLTRRSIFDDDPATPNTTNLYIGC
INPKMNEEMLCKEFGKYGPLASVKIMWPRSDEERTRVTNRGFVAFMTRKDAERALAALDG
KTVLGFEMKLGWGKAVRIPPQPLYTPIGVLKISTPPPPSGLPFNAQPRDRFRNDFTKPWG
RSKEEFDKTLSEAVVKVVIPTERNLLGLIHRMIEFVVREGPMFEAIIMSKEKNNPDFRFL
FDNKSQEQVYYRWKLYSILQGEPPSEWRTADFRMFRGGSIWRPPLLNPYLHGDEEAGEEE
QSPSQEEELKKGQLKTEHRERLETLLRGLTPRREDVGDAMLFCLERAEAAEEVVGCIAES
LSLLQTPLQKKIARLYLVSDILYNSCAKVANASYYRKYFEAKLPQIFGDISDAYRNIQAR
LQAEQFKQKIMGCFRVWEDWAVYPEPYLIQLQNIFLGLVKAGDEVIERVEVGSPDLDGAP
LDGAPLDGAPLDDLDGSPLAWDPASLDGVPVDDIDGVPLGAPIDDIDGMPLDDLAHSKVA
LSKWERVDDAEALPQANTESKWDSVGERYSGDNTNVSTNTKEGDGESEGDSSDDDSPSKY
DSADFKSSLSSFEMSESKRSRLRELEVKVMQFQDELETGKRPRKSGMNMQKQVEHYRNKL
LQKEFDKDDQEKKERSTPKSKDRSKKEERRDKTEESSKGREKEKSKRSQDRDRSRDRGRS
RDTEERTQKYRGHSPSKTKSKSPKKSKRSRSPSPARKTWRRSSSRSPHRSHKKTKKSKH
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgtgcagtatcagcatggcagacaaaaatggcaagaaagggaaacctgtaggtgttaag
agaacattgaccaagagagaacaagaagatctgaagaaaaaggaacaagaaaaagcagct
gacgtttttgaagagtttttagcatcttttgacagtaacgacaaaagtggggtgaaaacg
tttgttcgtggggggatcgtgaatgcaactaaagaagaggaagcagcagaggtaaaaaag
agcaagctttaccgaccgaacacgaagtttacttcagtgtcccagaatgtctcaccagca
cactcttcggaagtcagaaggccgattgttaaaaagaagacagaagagaagaagaagagc
aaccttgaacttttcaaagaggagctaaagcaaatacaggaggaacgtgaagaaaggcac
aaaaaaaagaagaatgagcctggaggaggatatggagaattggacataccactaacacga
cgatcaatatttgatgatgacccagcaacaccgaacacaacgaacctgtacattggctgc
attaacccaaagatgaatgaagaaatgctttgcaaagagtttggcaagtatggtcccctg
gcaagcgtgaagatcatgtggccccgtagtgacgaggaacgtaccagggtcacaaacaga
ggcttcgtggcctttatgaccaggaaagatgcagagagggccttggctgctctagacggt
aaaacagttttgggttttgaaatgaagctgggatgggggaaagctgttcgcatccctccc
cagcctctctatacacccataggggtactgaaaatctccacacccccacccccctctggc
ctgcccttcaatgctcagccccgagaccgcttccgtaatgactttaccaagccatggggc
aggtctaaggaggagtttgacaagactctgtccgaagccgtagtcaaagtggttatccca
acagaaaggaatctgttgggcctcatccacaggatgatagagtttgtggtgcgtgaggga
cccatgtttgaagccatcattatgagcaaagagaagaacaaccctgacttcaggttcctg
tttgacaacaaaagccaagagcaggtgtactaccgctggaaactctactccattctccag
ggcgagccccccagtgagtggaggacggcagacttccggatgttccgtgggggctccatc
tggaggccgcccctcctgaacccctacctccatggagacgaggaggcgggagaggaggaa
cagtctccctctcaggaggaggagctgaagaagggccagctgaagaccgagcacagagag
agactggagacactgctgagagggctcactcctcgtagggaggatgttggtgatgccatg
ctgttctgtctggagagagccgaggcagcggaggaggtggtggggtgcatcgcggagtcc
ctgtctctccttcagacaccactgcagaaaaagattgccagactgtacctggtatccgac
atcttgtacaactcctgtgccaaagttgccaatgcatcttattatcgcaaatattttgaa
gcaaaattgccccagatatttggtgacattagtgatgcatatcgaaacatacaagcaaga
ctacaagcggaacaattcaagcaaaagataatgggctgtttcagggtctgggaagactgg
gctgtctacccagagccctacctgatccagctgcagaatatctttctgggtcttgtcaag
gcaggagatgaagtgatcgagagggtagaggtggggtctccagacctggatggagcccca
ttggacggggcaccgttagatggagctccgctggacgaccttgacggctcgcccctggca
tgggaccctgcctccctagatggggtgcctgttgacgacatcgacggagttcccctgggt
gctcccatcgatgacattgatggaatgcctttggatgatctggcccactccaaagtggct
ctgtctaaatgggagagggtggacgatgctgaagctctcccacaagctaacactgaatcc
aaatgggacagtgtgggagagcgatattctggggacaacacaaatgtaagtactaacact
aaggaaggagatggcgaatcagagggtgacagcagcgatgatgacagcccatctaagtac
gacagtgctgacttcaagagctccctcagtagttttgagatgtctgagagcaagaggagc
cggctgagagagctggaggtgaaggtgatgcagttccaggatgagctggagactgggaag
aggcccaggaagtctggaatgaacatgcagaaacaggtggagcactacaggaacaagctg
ctacagaaggagtttgataaggatgaccaggagaagaaagagcgatccacgccgaagtca
aaagacagatcaaagaaagaggagaggagagacaagactgaggagagcagtaaaggacgg
gagaaggagaagagcaaaaggagtcaagaccgggacaggagcagggacaggggacgtagt
agagacacagaggaacggacacagaaatacagaggacattctccctcaaaaacaaagtca
aagtctcccaagaagtccaagcggtcccggtcgccctcgccagccaggaagacgtggagg
aggtctagctcccggtcaccacaccgctcccacaaaaagacaaagaagagcaaacactga

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