Oncorhynchus kisutch (coho salmon): 109873109
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Entry
109873109 CDS
T09179
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109873109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109873109
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109873109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
109873109
NCBI-ProteinID:
XP_020320243
Ensembl:
ENSOKIG00005028840
UniProt:
A0A8C7I2N5
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All DBs
Position
LG28:complement(15812587..15820501)
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AA seq
546 aa
AA seq
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MSGGFNFGQASNTGFSFGAPKTTAAPATGFGIASAAPTTSGGGFSFGPPNPAQPPNSTNS
TGGFSFGNPTQNSTPAGGGFSIGTPTAKLNLGTPAASQPALTGITMGMATPTSGAGFGLG
GGFTTQTTAVPTGGGFSFGTAGGLGAPVAQTPAQPAAAGGLSLGTPAATTQMMGGGFSFG
AAKVQAAPTVTAGGGFSFGNSAPATLSLGNQSTGLNSVAPASRAAPTTTQGGGFAFGGKP
SATPAPAVTASATQASLGSSLFAVPASTTAVTGFLGAAPTSAAPAATSAAGNTLGFMLKP
LGAVTATTTASAGTGFSLGMKPAGATGIGSTVPITGIATTITTVTASAPPVMSYTQLEGL
INKWSLELEDQERHFLQQATQVNAWDRTLVENGEKITSLHREMEKVKLDQRRLDQELDFI
LSQQKELEDLLSPLEESVKEQSGTIYMQNADEERERTYKLAENVDAQLKRMSQDLKEIIE
HLNTSCGPADTSDPLQQICKILNAHMDSLQWIDQNSVLLQRRVEDVSKLCDNRHKEQEKT
LRITFG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggattcaactttggacaagcgtccaatactggattcagctttggagctccc
aaaaccacagctgcgccagccacaggctttgggattgcaagtgctgcacctacaacttca
ggtggtggcttctcttttggaccccccaatcctgcccagcccccaaacagtacaaactca
actggaggattcagctttgggaaccctacacagaacagtactccagcaggtggaggcttc
tctattgggactcccactgctaaactcaatctgggcacacctgctgcctctcaaccagca
ctgacagggataactatggggatggcaacccccacctctggggcaggctttggacttggt
gggggtttcaccacacaaaccactgctgttcccacaggaggggggttcagctttgggacc
gcaggggggcttggagcccctgttgcccaaaccccggctcaaccagcagcagctggtggg
ctctctttaggaactcctgctgcaacaactcaaatgatgggaggtgggtttagttttggt
gccgccaaggtccaggcagcccctaccgtgaccgcaggagggggcttctcatttgggaac
agcgcccctgccaccctctccctggggaaccagtccacaggtctgaactctgtggccccg
gcctcaagagctgcaccaaccacaacccagggtggaggatttgcttttggtggcaaacct
tcagctactccagcccctgctgtaactgcctcggctacccaggcctcattaggttcttct
ctctttgcagtaccagcatcaacgacagcagtcacaggttttttgggtgctgcccccacc
tcagctgccccggctgccacatcggcagcaggaaataccctgggcttcatgctcaaaccc
ctgggagcagtcactgccaccaccacagcatcagctggcacaggtttttcactgggtatg
aaacctgcgggtgccactggcatcggctcaacggtcccaatcactggaatagccacaacc
atcactactgttacagcaagtgctcctccagtgatgtcctacacccaactagagggtctc
atcaacaagtggagtcttgagctggaggaccaggagaggcacttcttgcagcaggctacc
caggtcaacgcctgggaccgcacgctggtggagaacggagagaagatcacatcactgcac
agggagatggagaaggtgaaactggaccaaagaaggctggaccaggagctggacttcatc
ctgtcacaacagaaggaactggaggacctgctgtccccactggaggagtctgtcaaagaa
cagagtggaaccatctacatgcagaatgccgatgaggaacgcgagagaacgtacaagctt
gcagagaacgtggacgcccagctgaagagaatgtcccaagatctaaaggaaataattgaa
cacctgaacacatcctgtgggccagctgataccagtgacccgcttcagcagatctgtaaa
attctcaatgcccacatggactctcttcaatggattgaccagaactcggtgcttctacag
agaagggtggaggatgtgtccaaactctgcgacaaccgacacaaagagcaggagaagact
cttcgcataacatttggttaa
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