Oncorhynchus kisutch (coho salmon): 109873115
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Entry
109873115 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00512
Mucin type O-glycan biosynthesis
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
109873115
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109873115
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
109873115
Glycosyltransferases [BR:
oki01003
]
Glycan extension
O-Glycan
109873115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
TRIC
Motif
Other DBs
NCBI-GeneID:
109873115
NCBI-ProteinID:
XP_020320253
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All DBs
Position
LG3:complement(18764388..18766749)
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AA seq
344 aa
AA seq
DB search
MVIEPAKVLSISRSFLNSTWVPDEHYLELTQDYQRFRSTCKLLEYPLSCEEEYFPLAFSL
VVHHKVENFERLLRAIYAPQNFYCVHVDIKAKASFLASIIAITSCFENVFLASHPVSVVY
ASWSHVQADINCISDLYRASSHWKYFINLCGQDFPIKTNLEMVRSLWALAGDNSMESEAR
PRGKKSRWKKVHQVVDGKLQRTEQNKAPPPFGIPILLVGAYIVVNRGFVRAVLEDSKVLA
LIRWDNETWSPDEFLWATIQRLPGVPGSMRPKLDMTDMHALARLVKWPWYKXGIYVKVMC
VYGAGDLQWMLQQHHLFANKFDTDPIAIRCLEEHLKHKALAEIY
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgagccggctaaagtcctgtccatttcacgcagcttcctcaacagcacgtgg
gtcccagacgagcactacctggagctgacccaggactatcagaggttcaggtctacgtgc
aagttactggagtacccactgagttgtgaggaagaatacttccccctggccttctcgctg
gttgtccaccacaaggttgagaactttgagaggctgcttagagccatctacgccccccaa
aacttttactgcgtccacgtggatataaaggccaaagcgtccttccttgcttccatcata
gccatcacatcctgctttgaaaatgtgttcttggccagccatccggtcagtgtggtgtac
gcgagctggagccatgtccaggctgacatcaactgtataagtgatctgtacagggctagt
tcacactggaagtatttcattaacctctgtggccaggacttccccatcaagaccaacctg
gagatggtgcgcagcctgtgggcgctggcgggggacaacagcatggagtcggaggccagg
cccagaggtaagaagtcgcgctggaagaaagtgcatcaggttgttgatggcaaacttcaa
agaacagagcagaacaaagctcctccgccctttggtatacccatcttgttagttggggca
tacattgtggtgaataggggctttgtgcgtgctgtgctggaggacagcaaggtgttggct
cttattcggtgggataatgagacttggagtcctgatgagttcctgtgggccaccatccag
aggcttcctggcgtgcccggctccatgcgccccaagttagacatgacggacatgcacgcc
cttgccaggctggtgaagtggccgtggtataaanggggtatctatgttaaagtgatgtgt
gtatatggggccggagacctgcagtggatgctgcagcagcaccacctctttgccaacaag
tttgacacggaccccattgctatcagatgtctggaggagcaccttaagcataaggccctg
gcagaaatatactaa
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