Oncorhynchus kisutch (coho salmon): 109873147
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Entry
109873147 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109873147
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109873147
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109873147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-RING_16
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
109873147
NCBI-ProteinID:
XP_020320300
Ensembl:
ENSOKIG00005035763
LinkDB
All DBs
Position
LG28:21884305..21891335
Genome browser
AA seq
428 aa
AA seq
DB search
MCFQSTYLVKSDSKRTLKSRVSPTVMQPNSSELGVHQAGHGLSLTLLTRTPAGTTGGSAV
PETSGAVRVPILSSGSWESCRGGASSRRSRASSRTSSHSHSHSHGGGHQHSHSEPSEVDP
ADADLESGEPSTSFLELRYLFRWVQKSLPFIIILCAKLVIQHALGLAVGVGLFTTFLYVN
KNIQTQVFLQDRRSKIECVWLLLFLASSTLLLYYTFLTETLYYCLIFLNPAVEPLGFWEV
LWVVGITNFTLKFLIMGFKCLILLLPSSLVTYRAQGRWYMLTEEMGQVYQAVAPTPLWFR
YLVTYQKVDGNTGLTLGVLLALVYFILKLLGLYGQWGSFQKTVRIFLSGEHTGAAATRSQ
CSEAGDICPICQAEYRDPRALLCQHIFCDECIALWFNREKMCPLCCTAITDKVHKWRDGA
TSPYFQIY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttcagtcgacttacttggtgaagagtgattccaaaagaacgttgaaatcgagg
gtatccccaactgtgatgcagcctaactccagtgagctgggtgtccatcaggcaggacat
ggtttgtctctgacgctactgaccaggacaccagcagggactacagggggctctgctgtc
ccggagactagtggagcggtccgggtacctatcctctccagcgggtcctgggagtcatgt
agaggaggggcgtcatcccgtaggtccagagctagttccagaaccagttcccacagccac
tctcattcacatggtgggggacaccagcactcccacagtgagcccagtgaggtggacccg
gctgatgctgatctggagtcaggggagcccagcacctcattcttggagctgcgctacctc
ttccgctgggttcagaagagtcttcctttcataatcatcctttgtgctaaactggtcatc
caacatgccctaggtctagctgttggagttggcttatttacaacttttctttatgtgaat
aagaacattcaaacccaagtctttcttcaggatcgtcggtcaaagatagagtgcgtatgg
ctgctcctcttcctggcgtcctccacactcctgctttactacacttttctcactgagaca
ctttactattgcctcatcttcctaaacccagctgttgagcccctaggtttctgggaggtc
ctatgggtggtgggcatcaccaacttcacactcaagttcctcatcatggggtttaagtgc
cttatcctactgctgccctctagcctggtgacctacagagcccagggacggtggtacatg
ctgactgaagagatgggccaggtgtaccaggctgtggctcccacccccctatggttccgc
tacctggtcacctaccagaaagtggatggaaatactggcctcaccctgggagttctgctg
gctctggtctacttcatactaaagcttttaggattgtatggacagtgggggtctttccag
aaaactgtgaggatatttctcagtggcgagcacacgggggcagcagccaccaggagccag
tgcagtgaggctggggacatctgtcctatctgtcaggcagaatacagagacccaagggcc
ctcctgtgtcagcacattttttgtgacgagtgcattgctctctggttcaaccgggagaag
atgtgtccactctgctgcacggccatcacagacaaggtccacaagtggagggacggggcc
acgtcaccttacttccaaatctactga
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