Oncorhynchus kisutch (coho salmon): 109873152
Help
Entry
109873152 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2-like isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109873152
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109873152
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
109873152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
109873152
NCBI-ProteinID:
XP_020320307
Ensembl:
ENSOKIG00005024503
UniProt:
A0A8C7HIE9
LinkDB
All DBs
Position
LG28:complement(18502566..18551731)
Genome browser
AA seq
316 aa
AA seq
DB search
MSRPSSAGGGGGGLGSGKAGGGKHGGSGGAAASAAAAGVGAVAGSGSALPVAAVALPSAS
LHGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIRNLA
MEKVASTLPFPCKYASAGCLLSLHHSEKPDHEEVCEFRPYTCPCPGASCKWQGSLEAVMP
HLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFF
AVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHL
FADNGNLGINVTISMC
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcccgtcctctgcgggcggtgggggcggaggactcggttccgggaaagcaggc
ggaggaaagcacggcggttcggggggagctgctgcctcagctgcagccgccggagtagga
gctgtggccgggtctggctcggctctacctgtcgctgctgttgccttgccctcagcatcg
ctacatggacaatctgctgaacttacagccttgttcgagtgcccggtttgttttgactac
gttctaccaccgattctgcaatgccaggccggacatcttgtttgcaaccaatgtcgtcaa
aagctgagttgttgtccgacttgtcgcggccctctcaccccgagtatcaggaacttggct
atggaaaaagttgcttctactctaccgtttccttgtaagtatgcgtcagccggatgcctg
ctgtccctccaccacagtgagaagcctgatcacgaggaggtgtgtgagttccgtccctac
acctgcccgtgccccggggcctcctgcaagtggcagggctccctggaggccgtcatgccc
cacctgatgcacgcccacaagtccatcaccaccctgcagggagaggacatcgtcttcctg
gccacagacatcaacctgccgggggctgtggactgggtcatgatgcagtcctgcttcggc
caccacttcatgctggtcctggagaagcaagagaagtacgagggccaccagcagttcttt
gctgtggtgctgctcatcggaacgaggaagcaggccgagaacttcgcctaccgcctggag
ctcaacgggaaccggcggcgcctcacctgggaggccacgccccgctccatccacgacggc
gtggcagccgccatcatgaacagcgactgtctggtgtttgacacgtccatcgctcacctg
ttcgccgacaacggcaacctggggatcaacgttaccatctccatgtgctga
DBGET
integrated database retrieval system
