KEGG   Oncorhynchus kisutch (coho salmon): 109873184
Entry
109873184         CDS       T09179                                 
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109873184
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     109873184
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C KH_N4BP1_1st zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 109873184
NCBI-ProteinID: XP_020320359
Ensembl: ENSOKIG00005049869
LinkDB
Position
LG28:complement(15169271..15187818)
AA seq 971 aa
MVLELAVPANAGPLLHRSIPHIERIFRVRVSYGSAESSCDSANVSTSNIIIVHVAEGKED
DCTKAKDYIVSLTSPAHRKREHLTLAQHKQLVVLKPVIEYDSQAVVEVREHVVDISGGER
NVMTAWSMVEKIKMEKHPCREEASELTEAQQPSGESEEGNSSESESEHQLQVNSGSCKRT
ELFSATKPHRQLCRSPCLDRPSFSQSSTLPELRPDDTKAAAFLKQASDKVYQTKMEFALK
LGYSGEQVETVLNKLGAAALINDILAELVRLGNKGELEVQASSNTGTLVSRGGPCVKEAV
SPEVSLEDDSVDPYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFVEKGHKDITVF
VPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDSDG
IIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVV
PEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAKCG
TGLATAKGESGSEAKRVTPKRQSDPSIRSVACEPEERLSAVRKPEANSVPSLVSALSVPT
MQPAKSHAAGALNTRSASSPVPGSLQFTHSSLEHMSSVQYPHPPILVTNSHGASVTYSEQ
FPKYDSVSTDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEHGVYLRNPSQHCPEPCLSHS
NSDSFSSYGELYMSSVDSSLDESMKGQQSPAQSRLQASSHGGFHHEALTRVQSYGHEEPK
QGPCRKQSISHLVPHVQHPVVGARSSCPGDYPLPQNVLPSQSSQPGRSLGMTRMDSISDS
RLYESNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMQPCCERVMVRSMPDK
MEQIWRSPWENPPQVEHQERHVIPEHLYQTYRNLCNIFPSFVVHSVMEKNPHLTDPQQLA
AVIVTKLRSCH
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggttttggagctggcagtgcccgcaaatgcaggccctttgcttcaccgctccatcccg
cacattgagcgtattttccgggtaagggtcagctacggatccgcggagtcaagctgcgac
agcgcaaatgtcagcaccagcaatatcataatagtacatgtcgcggagggcaaggaagat
gactgcaccaaggcaaaagattacatcgtttccttaacttcgccagctcaccgaaagaga
gagcatctaacgttggctcaacacaaacagctggttgtgctgaagccagtcatcgagtat
gactctcaggctgtggtggaggtgagggagcatgtggtggacatctccggtggcgagagg
aacgtgatgacggcatggtcgatggtggagaagatcaaaatggagaaacacccttgcagg
gaagaggcctctgagctgactgaggcccagcagcccagtggggagtcggaggaggggaac
agctcagagagtgagtcagagcatcagctgcaagtgaacagcggcagctgtaagaggacg
gagctcttcagtgccaccaagcctcaccgtcagctctgtcgctctccatgcctggaccgg
cctagcttctcccagagcagtactctaccagagctccgccctgacgacaccaaggccgcc
gcattcctcaaacaggccagtgacaaggtgtaccaaaccaagatggagtttgccttgaag
ctgggatactcaggtgaacaggtggagactgtgctgaacaagttaggggctgctgccctc
atcaatgatattctggctgagcttgtgaggcttggtaataaaggtgaactggaagttcaa
gccagcagtaacacaggcacgttggtctcccgtggaggcccctgtgtcaaagaggctgtc
agtccggaggtgtcacttgaagatgattccgtggatccttatgataatctcaggcctatt
gtcattgatggatcgaatgtggcaatgagccatggaaacaaagaggttttctcttgcctt
ggtatccaattggctgttgattggtttgtggagaaagggcacaaagacatcacagtgttt
gttcctgcctggaggaaagagcagtcgagacctgatgcccccattacagaccaagacatt
ttgcggaagctggagaaagaaaagatcctagtgttcaccccatctagaagagtccaaggg
aggagagtggtgtgctatgatgatcgctttatagtgaagctggcctgtgactctgatggc
ataattgtgtcaaatgacaactacagggacttacagaatgagaagccggagtggaagaag
ttcatagaggagcggctgctgatgtactcgtttgtcaatgataaattcatgccacctgat
gatcctttgggaagacacggtccaagtttagagaattttctccgcaagcgtcctgttgtt
ccagagcacaaaaagcaaccctgtccatatgggaaaaaatgcacttatggacataagtgc
aagtactaccatccagagcgtgcaaaccagccccaacggtcagtggctgatgaactgagg
gcatttgccaagttgtctgctgtgaagacaatgagcgagggggccctggccaagtgtggc
actggactcgccacagctaagggggagagtggctctgaggctaaacgagtgaccccgaag
cgccagtccgaccccagcatccgctcagtcgcctgcgagccagaggagagactgtccgct
gtccgtaagcctgaggcaaattctgtgccttcccttgtgtctgccctcagcgtgcccacc
atgcagcctgcaaagagccatgcggctggtgccttgaacacacgatcagccagcagccca
gtacccggctccctccagttcacccacagctccctggagcatatgtctagtgtacagtac
ccacatccacccatcctagtcaccaacagccatggtgcttctgtcacttacagtgaacag
tttcctaagtacgattctgtgagcacggaccacggatactactctatgcttagtgatttt
tctaacatgagcatgagcagcatgcacaacgtggatagcttctgtagcatggagcatgag
cacggggtttatctgagaaatcccagccagcattgccctgagccctgcctcagccactct
aacagtgactccttttcctcttatggggaattatacatgagctcagtggacagtagcctg
gatgagagcatgaagggacagcagtctccagcacagagcagactccaggcctcctcccat
ggggggttccaccacgaggccctgacccgggtgcagagctatggccatgaggagcccaag
caaggtccatgcaggaagcagtccatatcccacctggtaccgcatgtccagcaccctgtt
gttggggcccggtccagctgcccaggggactaccccttacctcagaatgtcctcccatca
cagtcctcgcagccgggacgctccctgggcatgacacgtatggacagcatctcagactcc
aggctgtacgagagtaaccccatgaggcagcgcagacccccactgtgccgcgagcagcat
gccagctgggacccgctgccctgcggcagtgagtcctatggataccattcctaccccctg
agtaacagcctgatgcagccgtgttgtgagcgggtgatggtccgcagcatgcctgacaag
atggagcagatttggaggtctccatgggagaacccgcctcaagtcgagcaccaggagcgc
catgtcatcccagagcacctgtaccaaacataccgcaacctctgcaacatcttcccatct
ttcgtggtgcactctgtcatggagaaaaaccctcatctgacggacccacaacaactcgct
gccgtcattgtcacaaagctgaggtcttgccattga

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